Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.42■□□□□ 0.062e-8■■□□□ 14.5
RPS3P23396 TBCB-207ENST00000586868 466 ntTSL 3 BASIC10.86□□□□□ -0.672e-8■■□□□ 14.5
RPS3P23396 GPI-207ENST00000587521 557 ntTSL 511.06□□□□□ -0.641e-23■■□□□ 14.5
RPS3P23396 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.076e-10■■□□□ 14.5
RPS3P23396 FBXO2-206ENST00000642025 2215 nt19.8■□□□□ 0.766e-10■■□□□ 14.5
RPS3P23396 MIIP-203ENST00000466860 1709 ntTSL 517.33■□□□□ 0.362e-6■■□□□ 14.5
RPS3P23396 MIIP-205ENST00000478749 779 ntTSL 214.95□□□□□ -0.022e-6■■□□□ 14.5
RPS3P23396 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.042e-6■■□□□ 14.5
RPS3P23396 PTOV1-211ENST00000598632 1073 ntTSL 219.25■□□□□ 0.673e-9■■□□□ 14.5
RPS3P23396 PTOV1-203ENST00000594165 986 ntTSL 318.71■□□□□ 0.593e-9■■□□□ 14.5
RPS3P23396 PTOV1-217ENST00000601501 564 ntTSL 215.8■□□□□ 0.123e-9■■□□□ 14.5
RPS3P23396 PTOV1-202ENST00000594151 995 ntTSL 513.55□□□□□ -0.243e-9■■□□□ 14.5
RPS3P23396 PTOV1-221ENST00000602040 597 ntTSL 213.24□□□□□ -0.293e-9■■□□□ 14.5
RPS3P23396 H3F3B-202ENST00000586270 468 ntTSL 223.93■■□□□ 1.421e-15■■□□□ 14.5
RPS3P23396 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.484e-10■■□□□ 14.5
RPS3P23396 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.341e-9■■□□□ 14.5
RPS3P23396 TRIB3-203ENST00000449710 1070 ntTSL 516.84■□□□□ 0.291e-9■■□□□ 14.5
RPS3P23396 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.44□□□□□ -0.12e-8■■□□□ 14.5
RPS3P23396 HDAC2-212ENST00000521610 580 ntTSL 410.43□□□□□ -0.742e-8■■□□□ 14.5
RPS3P23396 HDAC2-216ENST00000523628 549 ntTSL 43.98□□□□□ -1.772e-8■■□□□ 14.5
RPS3P23396 HDAC2-202ENST00000425835 553 ntTSL 22.12□□□□□ -2.072e-8■■□□□ 14.5
RPS3P23396 ASGR1-203ENST00000570576 627 ntTSL 513.23□□□□□ -0.292e-16■■□□□ 14.5
RPS3P23396 PAICS-203ENST00000504188 491 ntTSL 220.61■□□□□ 0.892e-8■■□□□ 14.5
RPS3P23396 PAICS-206ENST00000510584 557 ntTSL 210.25□□□□□ -0.772e-8■■□□□ 14.5
RPS3P23396 COL9A3-203ENST00000462700 1237 ntTSL 318.35■□□□□ 0.531e-14■■□□□ 14.5
RPS3P23396 MESD-202ENST00000422879 1392 ntTSL 216.48■□□□□ 0.232e-11■■□□□ 14.5
RPS3P23396 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.342e-11■■□□□ 14.5
RPS3P23396 MESD-206ENST00000561312 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.442e-11■■□□□ 14.5
RPS3P23396 MESD-207ENST00000619987 3978 ntTSL 1 (best)10.52□□□□□ -0.732e-11■■□□□ 14.5
RPS3P23396 MESD-203ENST00000559537 539 ntTSL 410.09□□□□□ -0.792e-11■■□□□ 14.5
RPS3P23396 DDX39B-205ENST00000419020 583 ntTSL 310.52□□□□□ -0.732e-14■■□□□ 14.5
RPS3P23396 WDR13-206ENST00000479279 2486 ntTSL 1 (best)18.44■□□□□ 0.543e-7■■□□□ 14.5
RPS3P23396 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.353e-7■■□□□ 14.5
RPS3P23396 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.283e-7■■□□□ 14.5
RPS3P23396 RSRP1-222ENST00000570063 1821 ntTSL 517.66■□□□□ 0.421e-6■■□□□ 14.5
RPS3P23396 RSRP1-212ENST00000565733 772 ntTSL 313.81□□□□□ -0.21e-6■■□□□ 14.5
RPS3P23396 SKIV2L2-202ENST00000502953 557 ntTSL 42.54□□□□□ -22e-6■■□□□ 14.5
RPS3P23396 SKIV2L2-206ENST00000505565 695 ntTSL 31.91□□□□□ -2.12e-6■■□□□ 14.5
RPS3P23396 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.598e-9■■□□□ 14.5
RPS3P23396 RPS15A-208ENST00000572008 797 ntTSL 56.28□□□□□ -1.48e-9■■□□□ 14.5
RPS3P23396 RPS15A-212ENST00000576008 589 ntTSL 1 (best)5.52□□□□□ -1.538e-9■■□□□ 14.5
RPS3P23396 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.538e-9■■□□□ 14.5
RPS3P23396 RPS15A-202ENST00000562935 427 ntTSL 25.47□□□□□ -1.538e-9■■□□□ 14.5
RPS3P23396 RPS15A-207ENST00000569365 481 ntTSL 34.32□□□□□ -1.728e-9■■□□□ 14.5
RPS3P23396 RPS15A-210ENST00000574723 418 ntTSL 33.37□□□□□ -1.878e-9■■□□□ 14.5
RPS3P23396 ALB-204ENST00000441319 591 ntTSL 45.67□□□□□ -1.51e-323■■□□□ 14.5
RPS3P23396 GLUL-206ENST00000462444 793 ntTSL 28.45□□□□□ -1.063e-12■■□□□ 14.5
RPS3P23396 DCP2-207ENST00000513585 1572 ntTSL 216.43■□□□□ 0.222e-6■■□□□ 14.5
RPS3P23396 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.49□□□□□ -1.052e-6■■□□□ 14.5
RPS3P23396 DCP2-206ENST00000512751 570 ntTSL 36.91□□□□□ -1.32e-6■■□□□ 14.5
RPS3P23396 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.322e-6■■□□□ 14.5
RPS3P23396 DCP2-202ENST00000502635 514 ntTSL 52.06□□□□□ -2.082e-6■■□□□ 14.5
RPS3P23396 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31e-7■■□□□ 14.5
RPS3P23396 ACSS2-213ENST00000480978 844 ntTSL 220.31■□□□□ 0.845e-7■■□□□ 14.5
RPS3P23396 ACSS2-211ENST00000477932 2450 ntTSL 519.66■□□□□ 0.745e-7■■□□□ 14.5
RPS3P23396 ACSS2-210ENST00000476922 1527 ntTSL 217.84■□□□□ 0.455e-7■■□□□ 14.5
RPS3P23396 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.55■□□□□ 0.45e-7■■□□□ 14.5
RPS3P23396 PDCD6IP-217ENST00000498147 802 ntTSL 317.21■□□□□ 0.353e-6■■□□□ 14.5
RPS3P23396 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -05e-7■■□□□ 14.5
RPS3P23396 ACSS2-214ENST00000481284 2851 ntTSL 29.58□□□□□ -0.885e-7■■□□□ 14.5
RPS3P23396 PDCD6IP-215ENST00000494810 619 ntTSL 35.94□□□□□ -1.463e-6■■□□□ 14.5
RPS3P23396 PDCD6IP-212ENST00000484478 596 ntTSL 42.41□□□□□ -2.023e-6■■□□□ 14.5
RPS3P23396 ATXN2L-218ENST00000565971 3264 ntTSL 1 (best)14.49□□□□□ -0.097e-8■■□□□ 14.5
RPS3P23396 PLK1-203ENST00000562407 540 ntTSL 211.35□□□□□ -0.596e-15■■□□□ 14.5
RPS3P23396 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.59■■□□□ 1.532e-12■■□□□ 14.5
RPS3P23396 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.48■■□□□ 1.192e-12■■□□□ 14.5
RPS3P23396 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.192e-12■■□□□ 14.5
RPS3P23396 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.48■■□□□ 1.192e-12■■□□□ 14.5
RPS3P23396 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.4■■□□□ 1.182e-12■■□□□ 14.5
RPS3P23396 CLTA-208ENST00000493185 714 ntTSL 319.82■□□□□ 0.762e-12■■□□□ 14.5
RPS3P23396 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.682e-12■■□□□ 14.5
RPS3P23396 CLTA-205ENST00000464497 1890 ntTSL 517.82■□□□□ 0.442e-12■■□□□ 14.5
RPS3P23396 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.22e-12■■□□□ 14.5
RPS3P23396 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.61■□□□□ 0.092e-12■■□□□ 14.5
RPS3P23396 TIMM17A-203ENST00000482943 2523 ntTSL 26.65□□□□□ -1.353e-7■■□□□ 14.5
RPS3P23396 LASP1-206ENST00000579123 1874 ntTSL 216.55■□□□□ 0.246e-11■■□□□ 14.5
RPS3P23396 LASP1-207ENST00000581485 617 ntTSL 315.13■□□□□ 0.016e-11■■□□□ 14.5
RPS3P23396 LASP1-202ENST00000419929 762 ntTSL 315.06■□□□□ 06e-11■■□□□ 14.5
RPS3P23396 ISYNA1-214ENST00000583816 860 ntTSL 314.17□□□□□ -0.146e-11■■□□□ 14.5
RPS3P23396 ISYNA1-212ENST00000583309 371 ntTSL 211.88□□□□□ -0.516e-11■■□□□ 14.5
RPS3P23396 PKM-211ENST00000564276 753 ntTSL 1 (best)9.19□□□□□ -0.942e-16■■□□□ 14.5
RPS3P23396 ENTPD6-211ENST00000435520 878 ntTSL 316.94■□□□□ 0.34e-9■■□□□ 14.5
RPS3P23396 SND1-211ENST00000484767 460 ntTSL 49.04□□□□□ -0.963e-12■■□□□ 14.5
RPS3P23396 LINC00854-214ENST00000615433 874 ntAPPRIS ALT2 TSL 58.69□□□□□ -1.023e-12■■□□□ 14.5
RPS3P23396 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC8□□□□□ -1.133e-12■■□□□ 14.5
RPS3P23396 JAG1-202ENST00000423891 3758 ntTSL 26.9□□□□□ -1.33e-12■■□□□ 14.5
RPS3P23396 U2.6-201ENST00000619225 191 ntBASIC1.98□□□□□ -2.093e-12■■□□□ 14.5
RPS3P23396 EXT2-209ENST00000532479 580 ntTSL 418.65■□□□□ 0.581e-6■■□□□ 14.5
RPS3P23396 MBOAT7-207ENST00000449249 707 ntTSL 519.67■□□□□ 0.744e-8■■□□□ 14.5
RPS3P23396 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.023e-15■■□□□ 14.5
RPS3P23396 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.93■□□□□ 0.462e-9■■□□□ 14.5
RPS3P23396 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.382e-9■■□□□ 14.5
RPS3P23396 GLG1-213ENST00000567951 2918 ntTSL 1 (best)18.41■□□□□ 0.542e-7■■□□□ 14.5
RPS3P23396 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.062e-7■■□□□ 14.5
RPS3P23396 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.012e-7■■□□□ 14.5
RPS3P23396 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.072e-7■■□□□ 14.5
RPS3P23396 GLG1-206ENST00000562090 4037 ntTSL 214.03□□□□□ -0.162e-7■■□□□ 14.5
RPS3P23396 BCL2L1-205ENST00000422920 1157 ntTSL 224.33■■□□□ 1.491e-16■■□□□ 14.5
RPS3P23396 BCL2L1-208ENST00000450273 894 ntTSL 317.36■□□□□ 0.371e-16■■□□□ 14.5
RPS3P23396 BCL2L1-209ENST00000456404 914 ntTSL 216.94■□□□□ 0.31e-16■■□□□ 14.5
Retrieved 100 of 24,271 protein–RNA pairs in 208.2 ms