RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 AEBP2Q6ZN18 517 aaPredicted RBP16.78■□□□□ 0.28
HDAC2-202ENST00000425835 CHIC1Q5VXU3 224 aa16.29■□□□□ 0.2
HDAC2-202ENST00000425835 SENP3Q9H4L4 574 aaPredicted RBP14.4□□□□□ -0.1
HDAC2-202ENST00000425835 PHF23Q9BUL5 403 aaPredicted RBP14.35□□□□□ -0.11
HDAC2-202ENST00000425835 POTEDQ86YR6 584 aa13.98□□□□□ -0.17
HDAC2-202ENST00000425835 FOXD1Q16676 465 aa13.5□□□□□ -0.25
HDAC2-202ENST00000425835 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
HDAC2-202ENST00000425835 MSH5O43196 834 aa12.85□□□□□ -0.35
HDAC2-202ENST00000425835 ADRA2BP18089 450 aa12.68□□□□□ -0.38
HDAC2-202ENST00000425835 PPP6R1Q9UPN7 881 aa12.65□□□□□ -0.38
HDAC2-202ENST00000425835 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
HDAC2-202ENST00000425835 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
HDAC2-202ENST00000425835 CACNB1Q02641 598 aaPredicted RBP11.58□□□□□ -0.56
HDAC2-202ENST00000425835 KCNA4P22459 653 aa11.55□□□□□ -0.56
HDAC2-202ENST00000425835 SCAF1Q9H7N4 1312 aaKnown RBP11.55□□□□□ -0.56
HDAC2-202ENST00000425835 MAPK8IP2Q13387 824 aaPredicted RBP11.48□□□□□ -0.57
HDAC2-202ENST00000425835 NCBP3Q53F19 620 aaKnown RBP11.43□□□□□ -0.58
HDAC2-202ENST00000425835 CNKSR2Q8WXI2 1034 aa11.35□□□□□ -0.59
HDAC2-202ENST00000425835 DMRT2Q9Y5R5 561 aa11.35□□□□□ -0.59
HDAC2-202ENST00000425835 NPM3O75607 178 aaKnown RBP11.27□□□□□ -0.61
HDAC2-202ENST00000425835 RNF216Q9NWF9 866 aaPredicted RBP11.1□□□□□ -0.63
HDAC2-202ENST00000425835 HOXD11P31277 338 aaPredicted RBP11.02□□□□□ -0.65
HDAC2-202ENST00000425835 SLC4A1APQ9BWU0 796 aaKnown RBP11.02□□□□□ -0.65
HDAC2-202ENST00000425835 RNF39Q9H2S5 420 aa10.93□□□□□ -0.66
HDAC2-202ENST00000425835 DCAF8L1A6NGE4 600 aa10.88□□□□□ -0.67
HDAC2-202ENST00000425835 EHMT2Q96KQ7 1210 aa10.85□□□□□ -0.67
HDAC2-202ENST00000425835 POTEHQ6S545 545 aa10.79□□□□□ -0.68
HDAC2-202ENST00000425835 DNAJC5BQ9UF47 199 aa10.79□□□□□ -0.68
HDAC2-202ENST00000425835 C1QBPQ07021 282 aaKnown RBP10.7□□□□□ -0.7
HDAC2-202ENST00000425835 ZBTB22O15209 634 aa10.62□□□□□ -0.71
HDAC2-202ENST00000425835 SLC4A2P04920 1241 aa10.61□□□□□ -0.71
HDAC2-202ENST00000425835 CSRNP3Q8WYN3 585 aa10.6□□□□□ -0.71
HDAC2-202ENST00000425835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.59□□□□□ -0.714e-7■■□□□ 13.1
HDAC2-202ENST00000425835 FOXD4L1Q9NU39 408 aa10.59□□□□□ -0.71
HDAC2-202ENST00000425835 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.74
HDAC2-202ENST00000425835 U3KPZ7 1027 aaPredicted RBP10.39□□□□□ -0.75
HDAC2-202ENST00000425835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.25□□□□□ -0.77
HDAC2-202ENST00000425835 HNRNPUL2Q1KMD3 747 aaKnown RBP10.25□□□□□ -0.77
HDAC2-202ENST00000425835 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
HDAC2-202ENST00000425835 ATXN8OSP0DMR3 200 aa10.16□□□□□ -0.78
HDAC2-202ENST00000425835 ATF5Q9Y2D1 282 aaPredicted RBP10.15□□□□□ -0.78
HDAC2-202ENST00000425835 APLP2Q06481 763 aa10.14□□□□□ -0.79
HDAC2-202ENST00000425835 SPINK5Q9NQ38 1064 aaPredicted RBP10.11□□□□□ -0.79
HDAC2-202ENST00000425835 CAPN15O75808 1086 aa10.09□□□□□ -0.79
HDAC2-202ENST00000425835 TRHP20396 242 aaPredicted RBP10.07□□□□□ -0.8
HDAC2-202ENST00000425835 DSG3P32926 999 aa10.01□□□□□ -0.81
HDAC2-202ENST00000425835 ZNF219Q9P2Y4 722 aaPredicted RBP10□□□□□ -0.81
HDAC2-202ENST00000425835 ABCB7O75027 752 aa9.93□□□□□ -0.82
HDAC2-202ENST00000425835 POLA2Q14181 598 aa9.88□□□□□ -0.83
HDAC2-202ENST00000425835 SP7Q8TDD2 431 aaPredicted RBP9.72□□□□□ -0.85
HDAC2-202ENST00000425835 FBLN2P98095 1184 aa9.71□□□□□ -0.86
HDAC2-202ENST00000425835 MKRN4PQ13434 485 aaPredicted RBP9.69□□□□□ -0.86
HDAC2-202ENST00000425835 ZBTB12Q9Y330 459 aaPredicted RBP9.69□□□□□ -0.86
HDAC2-202ENST00000425835 CHRDL2Q6WN34 429 aa9.65□□□□□ -0.86
HDAC2-202ENST00000425835 FKBP8Q14318 412 aa9.63□□□□□ -0.87
HDAC2-202ENST00000425835 RBM42Q9BTD8 480 aaKnown RBP9.59□□□□□ -0.87
HDAC2-202ENST00000425835 OSCARQ8IYS5 282 aa9.56□□□□□ -0.88
HDAC2-202ENST00000425835 SPDYE4A6NLX3 237 aa9.53□□□□□ -0.88
HDAC2-202ENST00000425835 ZNF692Q9BU19 519 aaPredicted RBP9.45□□□□□ -0.9
HDAC2-202ENST00000425835 SPDYE2BA6NHP3 402 aa9.42□□□□□ -0.9
HDAC2-202ENST00000425835 SPDYE6P0CI01 402 aa9.42□□□□□ -0.9
HDAC2-202ENST00000425835 SPDYE2Q495Y8 402 aa9.42□□□□□ -0.9
HDAC2-202ENST00000425835 SSUH2Q9Y2M2 353 aa9.35□□□□□ -0.91
HDAC2-202ENST00000425835 HAX1O00165 279 aa9.33□□□□□ -0.92
HDAC2-202ENST00000425835 PABPN1Q86U42 306 aaKnown RBP eCLIP9.33□□□□□ -0.92
HDAC2-202ENST00000425835 PROM2Q8N271 834 aa9.29□□□□□ -0.92
HDAC2-202ENST00000425835 PIP4P2Q8N4L2 257 aa9.26□□□□□ -0.93
HDAC2-202ENST00000425835 AKT1S1Q96B36 256 aa9.26□□□□□ -0.93
HDAC2-202ENST00000425835 PLSCR2Q9NRY7 297 aa9.26□□□□□ -0.93
HDAC2-202ENST00000425835 FBXO3Q9UK99 471 aa9.22□□□□□ -0.93
HDAC2-202ENST00000425835 EVX2Q03828 476 aa9.2□□□□□ -0.94
HDAC2-202ENST00000425835 REM2Q8IYK8 340 aaPredicted RBP9.2□□□□□ -0.94
HDAC2-202ENST00000425835 CLEC11AQ9Y240 323 aa9.17□□□□□ -0.94
HDAC2-202ENST00000425835 SPDYE1Q8NFV5 336 aaPredicted RBP9.15□□□□□ -0.94
HDAC2-202ENST00000425835 STAG3Q9UJ98 1225 aa9.14□□□□□ -0.95
HDAC2-202ENST00000425835 LHX8Q68G74 356 aa9.13□□□□□ -0.95
HDAC2-202ENST00000425835 PITPNM1O00562 1244 aa9.11□□□□□ -0.95
HDAC2-202ENST00000425835 VASPP50552 380 aaPredicted RBP9.11□□□□□ -0.95
HDAC2-202ENST00000425835 FXR2P51116 673 aaKnown RBP eCLIP9.08□□□□□ -0.964e-7■■■■■ 27
HDAC2-202ENST00000425835 PRR29P0C7W0 189 aa9.06□□□□□ -0.96
HDAC2-202ENST00000425835 MIER1Q8N108 512 aa9.05□□□□□ -0.96
HDAC2-202ENST00000425835 PLCD3Q8N3E9 789 aa9.05□□□□□ -0.96
HDAC2-202ENST00000425835 KLHL34Q8N239 644 aa8.99□□□□□ -0.97
HDAC2-202ENST00000425835 PLEKHG5O94827 1062 aa8.98□□□□□ -0.97
HDAC2-202ENST00000425835 IFNLR1Q8IU57 520 aaPredicted RBP8.98□□□□□ -0.97
HDAC2-202ENST00000425835 CREBZFQ9NS37 354 aa8.94□□□□□ -0.98
HDAC2-202ENST00000425835 CHADLQ6NUI6 762 aa8.93□□□□□ -0.98
HDAC2-202ENST00000425835 GABBR2O75899 941 aa8.89□□□□□ -0.99
HDAC2-202ENST00000425835 PRKAR2AP13861 404 aaKnown RBP8.89□□□□□ -0.99
HDAC2-202ENST00000425835 ZBTB47Q9UFB7 747 aaPredicted RBP8.89□□□□□ -0.99
HDAC2-202ENST00000425835 SPOCK2Q92563 424 aa8.88□□□□□ -0.99
HDAC2-202ENST00000425835 RTN4Q9NQC3 1192 aaKnown RBP8.87□□□□□ -0.99
HDAC2-202ENST00000425835 AMER1Q5JTC6 1135 aaPredicted RBP8.86□□□□□ -0.99
HDAC2-202ENST00000425835 MNX1P50219 401 aaPredicted RBP8.82□□□□□ -1
HDAC2-202ENST00000425835 C19orf67A6NJJ6 358 aa8.81□□□□□ -1
HDAC2-202ENST00000425835 FARP1Q9Y4F1 1045 aaPredicted RBP8.81□□□□□ -1
HDAC2-202ENST00000425835 NPM1P06748 294 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC2-202ENST00000425835 CIZ1Q9ULV3 898 aaPredicted RBP8.78□□□□□ -1
HDAC2-202ENST00000425835 NUBP1P53384 320 aa8.76□□□□□ -1.01
HDAC2-202ENST00000425835 DCAF8Q5TAQ9 597 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms