RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
HDAC2-216ENST00000523628 CHIC1Q5VXU3 224 aa21.76■■□□□ 1.07
HDAC2-216ENST00000523628 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
HDAC2-216ENST00000523628 PHF23Q9BUL5 403 aaPredicted RBP19.26■□□□□ 0.67
HDAC2-216ENST00000523628 FOXD1Q16676 465 aa18.17■□□□□ 0.5
HDAC2-216ENST00000523628 PLPPR3Q6T4P5 718 aa17.41■□□□□ 0.38
HDAC2-216ENST00000523628 PPP6R1Q9UPN7 881 aa17.01■□□□□ 0.31
HDAC2-216ENST00000523628 MSH5O43196 834 aa17■□□□□ 0.31
HDAC2-216ENST00000523628 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
HDAC2-216ENST00000523628 PIAS4Q8N2W9 510 aaPredicted RBP16.98■□□□□ 0.31
HDAC2-216ENST00000523628 ADRA2BP18089 450 aa16.96■□□□□ 0.31
HDAC2-216ENST00000523628 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
HDAC2-216ENST00000523628 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
HDAC2-216ENST00000523628 DMRT2Q9Y5R5 561 aa15.48■□□□□ 0.07
HDAC2-216ENST00000523628 PPP4R3CPQ6ZMV5 832 aa15.27■□□□□ 0.04
HDAC2-216ENST00000523628 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
HDAC2-216ENST00000523628 HOXD11P31277 338 aaPredicted RBP14.93□□□□□ -0.02
HDAC2-216ENST00000523628 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.04
HDAC2-216ENST00000523628 DCAF8L1A6NGE4 600 aa14.82□□□□□ -0.04
HDAC2-216ENST00000523628 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
HDAC2-216ENST00000523628 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
HDAC2-216ENST00000523628 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
HDAC2-216ENST00000523628 NPM3O75607 178 aaKnown RBP14.48□□□□□ -0.09
HDAC2-216ENST00000523628 DNAJC5BQ9UF47 199 aa14.42□□□□□ -0.1
HDAC2-216ENST00000523628 C1QBPQ07021 282 aaKnown RBP14.31□□□□□ -0.12
HDAC2-216ENST00000523628 KCNA4P22459 653 aa14.22□□□□□ -0.13
HDAC2-216ENST00000523628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.21□□□□□ -0.136e-9■□□□□ 9
HDAC2-216ENST00000523628 U3KPZ7 1027 aaPredicted RBP13.92□□□□□ -0.18
HDAC2-216ENST00000523628 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
HDAC2-216ENST00000523628 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
HDAC2-216ENST00000523628 CAPN15O75808 1086 aa13.68□□□□□ -0.22
HDAC2-216ENST00000523628 DSG3P32926 999 aa13.59□□□□□ -0.23
HDAC2-216ENST00000523628 APLP2Q06481 763 aa13.56□□□□□ -0.24
HDAC2-216ENST00000523628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
HDAC2-216ENST00000523628 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
HDAC2-216ENST00000523628 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
HDAC2-216ENST00000523628 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.25
HDAC2-216ENST00000523628 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
HDAC2-216ENST00000523628 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
HDAC2-216ENST00000523628 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
HDAC2-216ENST00000523628 ABCB7O75027 752 aa13.36□□□□□ -0.27
HDAC2-216ENST00000523628 FOXD4L1Q9NU39 408 aa13.28□□□□□ -0.28
HDAC2-216ENST00000523628 POTEHQ6S545 545 aa13.16□□□□□ -0.3
HDAC2-216ENST00000523628 POLA2Q14181 598 aa13.12□□□□□ -0.31
HDAC2-216ENST00000523628 ZBTB22O15209 634 aa13.07□□□□□ -0.32
HDAC2-216ENST00000523628 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
HDAC2-216ENST00000523628 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
HDAC2-216ENST00000523628 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
HDAC2-216ENST00000523628 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
HDAC2-216ENST00000523628 OSCARQ8IYS5 282 aa12.69□□□□□ -0.38
HDAC2-216ENST00000523628 AKT1S1Q96B36 256 aa12.69□□□□□ -0.38
HDAC2-216ENST00000523628 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
HDAC2-216ENST00000523628 FBLN2P98095 1184 aa12.57□□□□□ -0.4
HDAC2-216ENST00000523628 REM2Q8IYK8 340 aaPredicted RBP12.56□□□□□ -0.4
HDAC2-216ENST00000523628 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
HDAC2-216ENST00000523628 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
HDAC2-216ENST00000523628 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
HDAC2-216ENST00000523628 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
HDAC2-216ENST00000523628 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
HDAC2-216ENST00000523628 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
HDAC2-216ENST00000523628 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
HDAC2-216ENST00000523628 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
HDAC2-216ENST00000523628 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.444e-7■■■■■ 27
HDAC2-216ENST00000523628 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
HDAC2-216ENST00000523628 SSUH2Q9Y2M2 353 aa12.31□□□□□ -0.44
HDAC2-216ENST00000523628 SPDYE1Q8NFV5 336 aaPredicted RBP12.24□□□□□ -0.45
HDAC2-216ENST00000523628 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
HDAC2-216ENST00000523628 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
HDAC2-216ENST00000523628 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
HDAC2-216ENST00000523628 HAX1O00165 279 aa12.13□□□□□ -0.47
HDAC2-216ENST00000523628 PRKAR2AP13861 404 aaKnown RBP12.11□□□□□ -0.47
HDAC2-216ENST00000523628 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
HDAC2-216ENST00000523628 EVX2Q03828 476 aa11.98□□□□□ -0.49
HDAC2-216ENST00000523628 CHADLQ6NUI6 762 aa11.97□□□□□ -0.49
HDAC2-216ENST00000523628 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
HDAC2-216ENST00000523628 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
HDAC2-216ENST00000523628 STAG3Q9UJ98 1225 aa11.84□□□□□ -0.51
HDAC2-216ENST00000523628 FARP1Q9Y4F1 1045 aaPredicted RBP11.81□□□□□ -0.52
HDAC2-216ENST00000523628 GABBR2O75899 941 aa11.73□□□□□ -0.53
HDAC2-216ENST00000523628 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
HDAC2-216ENST00000523628 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
HDAC2-216ENST00000523628 PROM2Q8N271 834 aa11.64□□□□□ -0.55
HDAC2-216ENST00000523628 CLCN6P51797 869 aa11.59□□□□□ -0.55
HDAC2-216ENST00000523628 ZRANB1Q9UGI0 708 aa11.57□□□□□ -0.56
HDAC2-216ENST00000523628 ZNF579Q8NAF0 562 aaKnown RBP11.55□□□□□ -0.56
HDAC2-216ENST00000523628 MNX1P50219 401 aaPredicted RBP11.54□□□□□ -0.56
HDAC2-216ENST00000523628 NPM1P06748 294 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDAC2-216ENST00000523628 PAK3O75914 559 aaPredicted RBP11.49□□□□□ -0.57
HDAC2-216ENST00000523628 POTEIP0CG38 1075 aa11.47□□□□□ -0.57
HDAC2-216ENST00000523628 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
HDAC2-216ENST00000523628 LHX8Q68G74 356 aa11.41□□□□□ -0.58
HDAC2-216ENST00000523628 GALR2O43603 387 aaPredicted RBP11.4□□□□□ -0.58
HDAC2-216ENST00000523628 PHF12Q96QT6 1004 aa11.39□□□□□ -0.59
HDAC2-216ENST00000523628 PLEKHG5O94827 1062 aa11.36□□□□□ -0.59
HDAC2-216ENST00000523628 MIER1Q8N108 512 aa11.36□□□□□ -0.59
HDAC2-216ENST00000523628 FKBP8Q14318 412 aa11.35□□□□□ -0.59
HDAC2-216ENST00000523628 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
HDAC2-216ENST00000523628 PLCD3Q8N3E9 789 aa11.27□□□□□ -0.61
HDAC2-216ENST00000523628 CCDC61Q9Y6R9 512 aa11.26□□□□□ -0.61
HDAC2-216ENST00000523628 MS4A3Q96HJ5 214 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms