Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP8P22894 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP8P22894 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP8P22894 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP8P22894 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP8P22894 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.82■□□□□ 0.44
MMP8P22894 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP8P22894 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.82■□□□□ 0.44
MMP8P22894 AC091167.2-201ENST00000579581 588 ntBASIC17.82■□□□□ 0.44
MMP8P22894 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
MMP8P22894 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.82■□□□□ 0.44
MMP8P22894 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MMP8P22894 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.82■□□□□ 0.44
MMP8P22894 AC005593.1-201ENST00000624894 515 ntBASIC17.82■□□□□ 0.44
MMP8P22894 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.82■□□□□ 0.44
MMP8P22894 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MMP8P22894 AC006538.1-201ENST00000567905 1585 ntBASIC17.82■□□□□ 0.44
MMP8P22894 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
MMP8P22894 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP8P22894 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MMP8P22894 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.81■□□□□ 0.44
MMP8P22894 SNX33P1-201ENST00000592116 1762 ntBASIC17.81■□□□□ 0.44
MMP8P22894 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MMP8P22894 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MMP8P22894 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
MMP8P22894 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.81■□□□□ 0.44
MMP8P22894 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 AC129492.6-201ENST00000611383 1305 ntBASIC17.81■□□□□ 0.44
MMP8P22894 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MMP8P22894 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
MMP8P22894 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MMP8P22894 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.81■□□□□ 0.44
MMP8P22894 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MMP8P22894 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.81■□□□□ 0.44
MMP8P22894 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.81■□□□□ 0.44
MMP8P22894 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.81■□□□□ 0.44
MMP8P22894 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.81■□□□□ 0.44
MMP8P22894 AC117500.6-201ENST00000624871 588 ntBASIC17.81■□□□□ 0.44
MMP8P22894 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MMP8P22894 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MMP8P22894 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MMP8P22894 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.81■□□□□ 0.44
MMP8P22894 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP8P22894 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MMP8P22894 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP8P22894 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP8P22894 SLC22A20-204ENST00000530038 1673 ntBASIC17.8■□□□□ 0.44
MMP8P22894 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.8■□□□□ 0.44
MMP8P22894 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
MMP8P22894 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP8P22894 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP8P22894 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP8P22894 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP8P22894 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.8■□□□□ 0.44
MMP8P22894 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP8P22894 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.8■□□□□ 0.44
MMP8P22894 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.8■□□□□ 0.44
MMP8P22894 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.8■□□□□ 0.44
MMP8P22894 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.8■□□□□ 0.44
MMP8P22894 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MMP8P22894 OR7E47P-204ENST00000575924 449 ntBASIC17.8■□□□□ 0.44
MMP8P22894 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.8■□□□□ 0.44
MMP8P22894 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.8■□□□□ 0.44
MMP8P22894 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP8P22894 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP8P22894 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP8P22894 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MMP8P22894 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MMP8P22894 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP8P22894 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.8■□□□□ 0.44
MMP8P22894 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.8■□□□□ 0.44
MMP8P22894 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP8P22894 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MMP8P22894 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 AC131009.4-201ENST00000624048 1740 ntBASIC17.79■□□□□ 0.44
MMP8P22894 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms