Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 NUS1P1-201ENST00000446295 882 ntBASIC15.81■□□□□ 0.12
TNFRSF1BP20333 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 AC096582.2-201ENST00000510860 516 ntBASIC15.81■□□□□ 0.12
TNFRSF1BP20333 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 AC233702.3-201ENST00000578656 1387 ntBASIC15.81■□□□□ 0.12
TNFRSF1BP20333 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 AL121672.3-201ENST00000608644 468 ntBASIC15.81■□□□□ 0.12
TNFRSF1BP20333 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TNFRSF1BP20333 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 KRT18P1-202ENST00000452408 1331 ntBASIC15.8■□□□□ 0.12
TNFRSF1BP20333 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 BNIP3P18-201ENST00000593976 575 ntBASIC15.8■□□□□ 0.12
TNFRSF1BP20333 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 INTS4P1-201ENST00000438455 1935 ntBASIC15.8■□□□□ 0.12
TNFRSF1BP20333 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFRSF1BP20333 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TNFRSF1BP20333 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms