Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TOP3BP1-201ENST00000420768 1380 ntBASIC17.46■□□□□ 0.39
ERCC2P18074 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC2P18074 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ERCC2P18074 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
ERCC2P18074 IGHV3-22-201ENST00000520721 359 ntBASIC17.46■□□□□ 0.39
ERCC2P18074 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
ERCC2P18074 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC2P18074 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ERCC2P18074 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC2P18074 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC2P18074 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ERCC2P18074 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.46■□□□□ 0.38
ERCC2P18074 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
ERCC2P18074 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.45■□□□□ 0.38
ERCC2P18074 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC2P18074 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC2P18074 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.45■□□□□ 0.38
ERCC2P18074 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ERCC2P18074 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC2P18074 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.45■□□□□ 0.38
ERCC2P18074 MRPL20P1-201ENST00000400819 433 ntBASIC17.45■□□□□ 0.38
ERCC2P18074 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
ERCC2P18074 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ERCC2P18074 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.45■□□□□ 0.38
ERCC2P18074 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.45■□□□□ 0.38
ERCC2P18074 AC079776.4-201ENST00000511039 504 ntBASIC17.45■□□□□ 0.38
ERCC2P18074 UNC93B6-202ENST00000528242 690 ntBASIC17.45■□□□□ 0.38
ERCC2P18074 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.45■□□□□ 0.38
ERCC2P18074 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.45■□□□□ 0.38
ERCC2P18074 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.45■□□□□ 0.38
ERCC2P18074 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ERCC2P18074 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.45■□□□□ 0.38
ERCC2P18074 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ERCC2P18074 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC2P18074 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ERCC2P18074 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
ERCC2P18074 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC2P18074 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC2P18074 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
ERCC2P18074 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
ERCC2P18074 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ERCC2P18074 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
ERCC2P18074 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ERCC2P18074 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 AL391256.1-201ENST00000443260 1855 ntBASIC17.44■□□□□ 0.38
ERCC2P18074 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.44■□□□□ 0.38
ERCC2P18074 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.44■□□□□ 0.38
ERCC2P18074 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.44■□□□□ 0.38
ERCC2P18074 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ERCC2P18074 AC026396.1-201ENST00000419388 421 ntBASIC17.44■□□□□ 0.38
ERCC2P18074 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.44■□□□□ 0.38
ERCC2P18074 AC108751.1-201ENST00000490852 363 ntBASIC17.44■□□□□ 0.38
ERCC2P18074 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
ERCC2P18074 RNA5SP415-201ENST00000517246 115 ntBASIC17.44■□□□□ 0.38
ERCC2P18074 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.44■□□□□ 0.38
ERCC2P18074 AP002490.2-201ENST00000524791 560 ntBASIC17.44■□□□□ 0.38
ERCC2P18074 AC107918.2-201ENST00000530817 355 ntBASIC17.44■□□□□ 0.38
ERCC2P18074 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ERCC2P18074 OR7E47P-204ENST00000575924 449 ntBASIC17.44■□□□□ 0.38
ERCC2P18074 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ERCC2P18074 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms