Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.06■□□□□ 0.32
CTPS1P17812 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS1P17812 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CTPS1P17812 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CTPS1P17812 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS1P17812 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS1P17812 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS1P17812 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.06■□□□□ 0.32
CTPS1P17812 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTPS1P17812 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTPS1P17812 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.06■□□□□ 0.32
CTPS1P17812 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS1P17812 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTPS1P17812 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.05■□□□□ 0.32
CTPS1P17812 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CTPS1P17812 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.05■□□□□ 0.32
CTPS1P17812 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CTPS1P17812 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.05■□□□□ 0.32
CTPS1P17812 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 AC005915.1-201ENST00000624912 2018 ntBASIC17.05■□□□□ 0.32
CTPS1P17812 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.05■□□□□ 0.32
CTPS1P17812 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.05■□□□□ 0.32
CTPS1P17812 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.05■□□□□ 0.32
CTPS1P17812 KRT18P3-201ENST00000451602 1288 ntBASIC17.05■□□□□ 0.32
CTPS1P17812 AC107918.2-201ENST00000530817 355 ntBASIC17.05■□□□□ 0.32
CTPS1P17812 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.05■□□□□ 0.32
CTPS1P17812 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.05■□□□□ 0.32
CTPS1P17812 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.05■□□□□ 0.32
CTPS1P17812 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.05■□□□□ 0.32
CTPS1P17812 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CTPS1P17812 REXO1L3P-201ENST00000622202 1288 ntBASIC17.05■□□□□ 0.32
CTPS1P17812 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CTPS1P17812 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.05■□□□□ 0.32
CTPS1P17812 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CTPS1P17812 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CTPS1P17812 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.05■□□□□ 0.32
CTPS1P17812 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 PRORSD1P-202ENST00000563365 2154 ntBASIC17.05■□□□□ 0.32
CTPS1P17812 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTPS1P17812 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS1P17812 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS1P17812 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS1P17812 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS1P17812 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.04■□□□□ 0.32
CTPS1P17812 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS1P17812 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.04■□□□□ 0.32
CTPS1P17812 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS1P17812 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS1P17812 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS1P17812 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.04■□□□□ 0.32
CTPS1P17812 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.04■□□□□ 0.32
CTPS1P17812 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.04■□□□□ 0.32
CTPS1P17812 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
CTPS1P17812 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.04■□□□□ 0.32
CTPS1P17812 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.04■□□□□ 0.32
CTPS1P17812 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CTPS1P17812 KRT18P58-201ENST00000527480 1120 ntBASIC17.04■□□□□ 0.32
CTPS1P17812 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CTPS1P17812 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.04■□□□□ 0.32
CTPS1P17812 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.04■□□□□ 0.32
CTPS1P17812 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CTPS1P17812 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS1P17812 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS1P17812 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.04■□□□□ 0.32
CTPS1P17812 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CTPS1P17812 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTPS1P17812 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTPS1P17812 PCDHB17P-201ENST00000539533 2393 ntBASIC17.03■□□□□ 0.32
CTPS1P17812 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.03■□□□□ 0.32
CTPS1P17812 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTPS1P17812 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTPS1P17812 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTPS1P17812 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.03■□□□□ 0.32
CTPS1P17812 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTPS1P17812 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTPS1P17812 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTPS1P17812 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTPS1P17812 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTPS1P17812 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CTPS1P17812 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.03■□□□□ 0.32
CTPS1P17812 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTPS1P17812 CXCL1P1-201ENST00000502804 216 ntBASIC17.03■□□□□ 0.32
CTPS1P17812 RNA5SP416-201ENST00000516838 111 ntBASIC17.03■□□□□ 0.32
CTPS1P17812 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.03■□□□□ 0.32
CTPS1P17812 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.03■□□□□ 0.32
CTPS1P17812 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.03■□□□□ 0.32
CTPS1P17812 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms