Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H2AFXP16104 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2AFXP16104 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2AFXP16104 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.64■□□□□ 0.41
H2AFXP16104 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2AFXP16104 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H2AFXP16104 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H2AFXP16104 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H2AFXP16104 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
H2AFXP16104 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.64■□□□□ 0.41
H2AFXP16104 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.63■□□□□ 0.41
H2AFXP16104 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 AC010460.3-201ENST00000511359 1579 ntBASIC17.63■□□□□ 0.41
H2AFXP16104 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
H2AFXP16104 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.63■□□□□ 0.41
H2AFXP16104 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.63■□□□□ 0.41
H2AFXP16104 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.63■□□□□ 0.41
H2AFXP16104 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.63■□□□□ 0.41
H2AFXP16104 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.63■□□□□ 0.41
H2AFXP16104 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
H2AFXP16104 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.63■□□□□ 0.41
H2AFXP16104 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2AFXP16104 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
H2AFXP16104 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.62■□□□□ 0.41
H2AFXP16104 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
H2AFXP16104 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
H2AFXP16104 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.62■□□□□ 0.41
H2AFXP16104 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
H2AFXP16104 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
H2AFXP16104 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.62■□□□□ 0.41
H2AFXP16104 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.62■□□□□ 0.41
H2AFXP16104 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.62■□□□□ 0.41
H2AFXP16104 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.62■□□□□ 0.41
H2AFXP16104 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.62■□□□□ 0.41
H2AFXP16104 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
H2AFXP16104 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
H2AFXP16104 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
H2AFXP16104 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.62■□□□□ 0.41
H2AFXP16104 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
H2AFXP16104 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
H2AFXP16104 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.62■□□□□ 0.41
H2AFXP16104 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2AFXP16104 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.61■□□□□ 0.41
H2AFXP16104 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.61■□□□□ 0.41
H2AFXP16104 AC007191.1-201ENST00000623179 2995 ntBASIC17.61■□□□□ 0.41
H2AFXP16104 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2AFXP16104 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.61■□□□□ 0.41
H2AFXP16104 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.61■□□□□ 0.41
H2AFXP16104 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2AFXP16104 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
H2AFXP16104 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
H2AFXP16104 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
H2AFXP16104 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H2AFXP16104 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.61■□□□□ 0.41
H2AFXP16104 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H2AFXP16104 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2AFXP16104 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2AFXP16104 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2AFXP16104 AC069152.1-201ENST00000438030 544 ntBASIC17.61■□□□□ 0.41
H2AFXP16104 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.61■□□□□ 0.41
H2AFXP16104 AC116562.2-201ENST00000507042 360 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms