Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC1P07992 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC1P07992 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC1P07992 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC1P07992 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC1P07992 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.11■□□□□ 0.01
ERCC1P07992 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ERCC1P07992 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC1P07992 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC1P07992 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC1P07992 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC1P07992 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.1■□□□□ 0.01
ERCC1P07992 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ERCC1P07992 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.1■□□□□ 0.01
ERCC1P07992 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.1■□□□□ 0.01
ERCC1P07992 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.1■□□□□ 0.01
ERCC1P07992 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.1■□□□□ 0.01
ERCC1P07992 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.1■□□□□ 0.01
ERCC1P07992 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ERCC1P07992 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ERCC1P07992 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.1■□□□□ 0.01
ERCC1P07992 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.1■□□□□ 0.01
ERCC1P07992 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.1■□□□□ 0.01
ERCC1P07992 IGHV3-52-201ENST00000519770 353 ntBASIC15.1■□□□□ 0.01
ERCC1P07992 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.1■□□□□ 0.01
ERCC1P07992 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.1■□□□□ 0.01
ERCC1P07992 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ERCC1P07992 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC1P07992 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.1■□□□□ 0.01
ERCC1P07992 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.1■□□□□ 0.01
ERCC1P07992 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.1■□□□□ 0.01
ERCC1P07992 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.1■□□□□ 0.01
ERCC1P07992 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
ERCC1P07992 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ERCC1P07992 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.09■□□□□ 0.01
ERCC1P07992 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.09■□□□□ 0.01
ERCC1P07992 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.09■□□□□ 0.01
ERCC1P07992 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
ERCC1P07992 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 AC103564.2-201ENST00000432853 1299 ntBASIC15.09■□□□□ 0.01
ERCC1P07992 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.09■□□□□ 0.01
ERCC1P07992 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.09■□□□□ 0.01
ERCC1P07992 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.09■□□□□ 0.01
ERCC1P07992 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.09■□□□□ 0.01
ERCC1P07992 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.09■□□□□ 0.01
ERCC1P07992 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
ERCC1P07992 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ERCC1P07992 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ERCC1P07992 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms