Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHGBP05060 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.32■□□□□ 0.84
CHGBP05060 GPX1P2-201ENST00000429271 606 ntBASIC20.32■□□□□ 0.84
CHGBP05060 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.32■□□□□ 0.84
CHGBP05060 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.32■□□□□ 0.84
CHGBP05060 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.32■□□□□ 0.84
CHGBP05060 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.32■□□□□ 0.84
CHGBP05060 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.32■□□□□ 0.84
CHGBP05060 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.32■□□□□ 0.84
CHGBP05060 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.32■□□□□ 0.84
CHGBP05060 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CHGBP05060 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.32■□□□□ 0.84
CHGBP05060 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.32■□□□□ 0.84
CHGBP05060 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHGBP05060 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.32■□□□□ 0.84
CHGBP05060 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.32■□□□□ 0.84
CHGBP05060 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHGBP05060 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CHGBP05060 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CHGBP05060 AC099398.1-201ENST00000567919 2776 ntBASIC20.31■□□□□ 0.84
CHGBP05060 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CHGBP05060 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 AC131009.4-201ENST00000624048 1740 ntBASIC20.31■□□□□ 0.84
CHGBP05060 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.31■□□□□ 0.84
CHGBP05060 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.31■□□□□ 0.84
CHGBP05060 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.31■□□□□ 0.84
CHGBP05060 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHGBP05060 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.31■□□□□ 0.84
CHGBP05060 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.31■□□□□ 0.84
CHGBP05060 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.31■□□□□ 0.84
CHGBP05060 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHGBP05060 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHGBP05060 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.31■□□□□ 0.84
CHGBP05060 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.31■□□□□ 0.84
CHGBP05060 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.31■□□□□ 0.84
CHGBP05060 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHGBP05060 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CHGBP05060 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHGBP05060 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHGBP05060 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.3■□□□□ 0.84
CHGBP05060 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.3■□□□□ 0.84
CHGBP05060 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHGBP05060 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.3■□□□□ 0.84
CHGBP05060 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.3■□□□□ 0.84
CHGBP05060 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.3■□□□□ 0.84
CHGBP05060 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CHGBP05060 MCCD1P2-201ENST00000423228 335 ntBASIC20.3■□□□□ 0.84
CHGBP05060 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.3■□□□□ 0.84
CHGBP05060 AC002347.1-201ENST00000569543 541 ntBASIC20.3■□□□□ 0.84
CHGBP05060 AP002472.1-201ENST00000577490 586 ntBASIC20.3■□□□□ 0.84
CHGBP05060 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.3■□□□□ 0.84
CHGBP05060 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.3■□□□□ 0.84
CHGBP05060 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CHGBP05060 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.3■□□□□ 0.84
CHGBP05060 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.3■□□□□ 0.84
CHGBP05060 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.3■□□□□ 0.84
CHGBP05060 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.3■□□□□ 0.84
CHGBP05060 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHGBP05060 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CHGBP05060 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.29■□□□□ 0.84
CHGBP05060 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CHGBP05060 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.29■□□□□ 0.84
CHGBP05060 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.29■□□□□ 0.84
CHGBP05060 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms