Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 AC105917.1-201ENST00000506637 2539 ntBASIC15.31■□□□□ 0.04
HLA-DPB1P04440 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 BX276092.5-203ENST00000456199 560 ntBASIC15.31■□□□□ 0.04
HLA-DPB1P04440 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.31■□□□□ 0.04
HLA-DPB1P04440 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPB1P04440 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.3■□□□□ 0.04
HLA-DPB1P04440 MYCLP1-201ENST00000372451 1075 ntBASIC15.3■□□□□ 0.04
HLA-DPB1P04440 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 AC068472.1-201ENST00000474589 881 ntBASIC15.3■□□□□ 0.04
HLA-DPB1P04440 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 GUSBP12-201ENST00000513727 720 ntBASIC15.3■□□□□ 0.04
HLA-DPB1P04440 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 KRT8P26-201ENST00000534154 1276 ntBASIC15.3■□□□□ 0.04
HLA-DPB1P04440 AC103702.1-201ENST00000548801 2630 ntBASIC15.3■□□□□ 0.04
HLA-DPB1P04440 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 IGHV3-41-201ENST00000613121 348 ntBASIC15.3■□□□□ 0.04
HLA-DPB1P04440 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 AC124864.1-201ENST00000623408 392 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms