Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TUBB4AP04350 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TUBB4AP04350 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBB4AP04350 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBB4AP04350 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 AL136379.1-201ENST00000623471 2642 ntBASIC18.23■□□□□ 0.51
TUBB4AP04350 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBB4AP04350 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TUBB4AP04350 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
TUBB4AP04350 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 AC144831.1-201ENST00000573312 2656 ntBASIC18.23■□□□□ 0.51
TUBB4AP04350 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TUBB4AP04350 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBB4AP04350 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TUBB4AP04350 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TUBB4AP04350 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBB4AP04350 AC068472.1-201ENST00000474589 881 ntBASIC18.23■□□□□ 0.51
TUBB4AP04350 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBB4AP04350 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.23■□□□□ 0.51
TUBB4AP04350 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TUBB4AP04350 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
TUBB4AP04350 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TUBB4AP04350 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TUBB4AP04350 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBB4AP04350 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TUBB4AP04350 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
TUBB4AP04350 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.22■□□□□ 0.51
TUBB4AP04350 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 AC107956.1-201ENST00000494359 873 ntBASIC18.22■□□□□ 0.51
TUBB4AP04350 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.22■□□□□ 0.51
TUBB4AP04350 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.22■□□□□ 0.51
TUBB4AP04350 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TUBB4AP04350 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBB4AP04350 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBB4AP04350 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.22■□□□□ 0.51
TUBB4AP04350 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TUBB4AP04350 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
TUBB4AP04350 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.21■□□□□ 0.51
TUBB4AP04350 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.21■□□□□ 0.51
TUBB4AP04350 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 DBET-201ENST00000630918 3363 ntBASIC18.21■□□□□ 0.51
TUBB4AP04350 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.21■□□□□ 0.51
TUBB4AP04350 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.21■□□□□ 0.51
TUBB4AP04350 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TUBB4AP04350 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
TUBB4AP04350 AL596275.1-201ENST00000423464 877 ntBASIC18.21■□□□□ 0.51
TUBB4AP04350 AC012618.2-201ENST00000428058 849 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms