Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
MT-ND3P03897 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.36■□□□□ 0.37
MT-ND3P03897 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.36■□□□□ 0.37
MT-ND3P03897 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 LINC02199-201ENST00000506655 2702 ntBASIC17.35■□□□□ 0.37
MT-ND3P03897 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.35■□□□□ 0.37
MT-ND3P03897 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
MT-ND3P03897 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 AL592071.1-201ENST00000611956 408 ntBASIC17.35■□□□□ 0.37
MT-ND3P03897 AC124864.1-201ENST00000623408 392 ntBASIC17.35■□□□□ 0.37
MT-ND3P03897 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.35■□□□□ 0.37
MT-ND3P03897 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.35■□□□□ 0.37
MT-ND3P03897 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.35■□□□□ 0.37
MT-ND3P03897 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MT-ND3P03897 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.35■□□□□ 0.37
MT-ND3P03897 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MT-ND3P03897 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.35■□□□□ 0.37
MT-ND3P03897 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.35■□□□□ 0.37
MT-ND3P03897 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.35■□□□□ 0.37
MT-ND3P03897 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND3P03897 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.34■□□□□ 0.37
MT-ND3P03897 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
MT-ND3P03897 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
MT-ND3P03897 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
MT-ND3P03897 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-ND3P03897 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
MT-ND3P03897 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.34■□□□□ 0.37
MT-ND3P03897 AC246785.2-201ENST00000432512 513 ntBASIC17.34■□□□□ 0.37
MT-ND3P03897 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.34■□□□□ 0.37
MT-ND3P03897 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
MT-ND3P03897 KRT18P31-201ENST00000506277 1292 ntBASIC17.34■□□□□ 0.37
MT-ND3P03897 FOSL1P1-201ENST00000511041 816 ntBASIC17.34■□□□□ 0.37
MT-ND3P03897 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
MT-ND3P03897 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-ND3P03897 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-ND3P03897 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.34■□□□□ 0.37
MT-ND3P03897 AC026691.1-201ENST00000602502 2017 ntBASIC17.34■□□□□ 0.37
MT-ND3P03897 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 AC019129.2-201ENST00000609837 1235 ntBASIC17.34■□□□□ 0.37
MT-ND3P03897 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.34■□□□□ 0.37
MT-ND3P03897 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-ND3P03897 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-ND3P03897 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
MT-ND3P03897 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
MT-ND3P03897 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.34■□□□□ 0.37
MT-ND3P03897 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND3P03897 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.33■□□□□ 0.37
MT-ND3P03897 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.33■□□□□ 0.37
MT-ND3P03897 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
MT-ND3P03897 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.33■□□□□ 0.36
MT-ND3P03897 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms