Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.49□□□□□ -0.25
IFNA1P01562 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.48□□□□□ -0.25
IFNA1P01562 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.48□□□□□ -0.25
IFNA1P01562 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
IFNA1P01562 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.48□□□□□ -0.25
IFNA1P01562 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
IFNA1P01562 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
IFNA1P01562 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
IFNA1P01562 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.48□□□□□ -0.25
IFNA1P01562 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.48□□□□□ -0.25
IFNA1P01562 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.48□□□□□ -0.25
IFNA1P01562 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.48□□□□□ -0.25
IFNA1P01562 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.48□□□□□ -0.25
IFNA1P01562 AC002558.1-201ENST00000488906 803 ntBASIC13.48□□□□□ -0.25
IFNA1P01562 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.48□□□□□ -0.25
IFNA1P01562 MIR4674-201ENST00000582457 87 ntBASIC13.48□□□□□ -0.25
IFNA1P01562 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.48□□□□□ -0.25
IFNA1P01562 AL023875.1-201ENST00000640777 796 ntBASIC13.48□□□□□ -0.25
IFNA1P01562 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
IFNA1P01562 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 AC144831.1-201ENST00000573312 2656 ntBASIC13.48□□□□□ -0.25
IFNA1P01562 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.48□□□□□ -0.25
IFNA1P01562 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 FSCN1P1-201ENST00000568912 1481 ntBASIC13.48□□□□□ -0.25
IFNA1P01562 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
IFNA1P01562 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFNA1P01562 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
IFNA1P01562 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
IFNA1P01562 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
IFNA1P01562 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.47□□□□□ -0.25
IFNA1P01562 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 AL391256.1-201ENST00000443260 1855 ntBASIC13.47□□□□□ -0.25
IFNA1P01562 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.47□□□□□ -0.25
IFNA1P01562 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 MFAP1P1-201ENST00000442257 1255 ntBASIC13.47□□□□□ -0.25
IFNA1P01562 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 AC011506.1-201ENST00000474329 610 ntBASIC13.47□□□□□ -0.25
IFNA1P01562 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.47□□□□□ -0.25
IFNA1P01562 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.47□□□□□ -0.25
IFNA1P01562 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
IFNA1P01562 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.47□□□□□ -0.25
IFNA1P01562 AC069544.1-201ENST00000609399 999 ntBASIC13.47□□□□□ -0.25
IFNA1P01562 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
IFNA1P01562 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.47□□□□□ -0.25
IFNA1P01562 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
IFNA1P01562 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.47□□□□□ -0.25
IFNA1P01562 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
IFNA1P01562 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
IFNA1P01562 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.47□□□□□ -0.25
IFNA1P01562 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.47□□□□□ -0.25
IFNA1P01562 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.47□□□□□ -0.25
IFNA1P01562 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFNA1P01562 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
IFNA1P01562 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.46□□□□□ -0.25
IFNA1P01562 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms