Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 AC141586.5-201ENST00000624546 2050 ntBASIC16.84■□□□□ 0.29
PCDHGA12O60330 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA12O60330 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGA12O60330 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.83■□□□□ 0.29
PCDHGA12O60330 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.83■□□□□ 0.29
PCDHGA12O60330 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGA12O60330 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGA12O60330 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGA12O60330 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
PCDHGA12O60330 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGA12O60330 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 AC002056.1-201ENST00000395613 760 ntBASIC16.83■□□□□ 0.28
PCDHGA12O60330 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 ADH5P3-201ENST00000433842 1137 ntBASIC16.83■□□□□ 0.28
PCDHGA12O60330 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 COX20P2-201ENST00000452636 358 ntBASIC16.83■□□□□ 0.28
PCDHGA12O60330 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 AC006116.8-202ENST00000587620 1550 ntBASIC16.83■□□□□ 0.28
PCDHGA12O60330 AC015911.4-201ENST00000588022 1070 ntBASIC16.83■□□□□ 0.28
PCDHGA12O60330 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 LINC00628-201ENST00000628516 1289 ntBASIC16.83■□□□□ 0.28
PCDHGA12O60330 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGA12O60330 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA12O60330 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.82■□□□□ 0.28
PCDHGA12O60330 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 TNRC18P3-201ENST00000441896 2691 ntBASIC16.82■□□□□ 0.28
PCDHGA12O60330 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 AC109322.1-201ENST00000524499 1264 ntBASIC16.82■□□□□ 0.28
PCDHGA12O60330 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.82■□□□□ 0.28
PCDHGA12O60330 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA12O60330 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA12O60330 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 AC092919.2-201ENST00000623631 1645 ntBASIC16.81■□□□□ 0.28
PCDHGA12O60330 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 AD000864.1-201ENST00000624076 2295 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms