Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LCMT2O60294 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.22■□□□□ 0.19
LCMT2O60294 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LCMT2O60294 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.22■□□□□ 0.19
LCMT2O60294 TUBB8P12-201ENST00000308911 1335 ntBASIC16.22■□□□□ 0.19
LCMT2O60294 TUBB7P-202ENST00000428444 1305 ntBASIC16.22■□□□□ 0.19
LCMT2O60294 TUBB8P7-204ENST00000567960 1332 ntBASIC16.22■□□□□ 0.19
LCMT2O60294 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.22■□□□□ 0.19
LCMT2O60294 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.22■□□□□ 0.19
LCMT2O60294 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.22■□□□□ 0.19
LCMT2O60294 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LCMT2O60294 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LCMT2O60294 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.22■□□□□ 0.19
LCMT2O60294 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LCMT2O60294 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
LCMT2O60294 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LCMT2O60294 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LCMT2O60294 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.22■□□□□ 0.19
LCMT2O60294 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.22■□□□□ 0.19
LCMT2O60294 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.22■□□□□ 0.19
LCMT2O60294 AC010654.1-201ENST00000615722 808 ntBASIC16.22■□□□□ 0.19
LCMT2O60294 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.22■□□□□ 0.19
LCMT2O60294 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.22■□□□□ 0.19
LCMT2O60294 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LCMT2O60294 TOP3BP1-201ENST00000420768 1380 ntBASIC16.22■□□□□ 0.19
LCMT2O60294 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LCMT2O60294 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LCMT2O60294 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 AC129492.6-201ENST00000611383 1305 ntBASIC16.21■□□□□ 0.19
LCMT2O60294 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.21■□□□□ 0.19
LCMT2O60294 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LCMT2O60294 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.21■□□□□ 0.19
LCMT2O60294 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.21■□□□□ 0.19
LCMT2O60294 AC009053.2-201ENST00000563701 2365 ntBASIC16.21■□□□□ 0.19
LCMT2O60294 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.21■□□□□ 0.19
LCMT2O60294 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LCMT2O60294 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LCMT2O60294 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
LCMT2O60294 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.21■□□□□ 0.19
LCMT2O60294 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.21■□□□□ 0.19
LCMT2O60294 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.21■□□□□ 0.19
LCMT2O60294 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.21■□□□□ 0.19
LCMT2O60294 IGLL3P-201ENST00000412472 434 ntBASIC16.21■□□□□ 0.19
LCMT2O60294 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.21■□□□□ 0.19
LCMT2O60294 HCG4B-203ENST00000450128 991 ntBASIC16.21■□□□□ 0.19
LCMT2O60294 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.21■□□□□ 0.19
LCMT2O60294 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.21■□□□□ 0.19
LCMT2O60294 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.21■□□□□ 0.19
LCMT2O60294 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.21■□□□□ 0.19
LCMT2O60294 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.21■□□□□ 0.19
LCMT2O60294 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LCMT2O60294 NKILA-202ENST00000614771 2598 ntBASIC16.21■□□□□ 0.18
LCMT2O60294 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
LCMT2O60294 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LCMT2O60294 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.2■□□□□ 0.18
LCMT2O60294 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
LCMT2O60294 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.2■□□□□ 0.18
LCMT2O60294 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.2■□□□□ 0.18
LCMT2O60294 PRORSD1P-202ENST00000563365 2154 ntBASIC16.2■□□□□ 0.18
LCMT2O60294 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms