Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.08■□□□□ 0
SGCEO43556 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.08■□□□□ 0
SGCEO43556 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.08■□□□□ 0
SGCEO43556 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.08■□□□□ 0
SGCEO43556 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
SGCEO43556 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.08■□□□□ 0
SGCEO43556 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.08■□□□□ 0
SGCEO43556 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.08■□□□□ 0
SGCEO43556 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.07■□□□□ 0
SGCEO43556 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 AC022211.2-201ENST00000585075 2527 ntBASIC15.07■□□□□ 0
SGCEO43556 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SGCEO43556 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.07■□□□□ 0
SGCEO43556 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.07■□□□□ 0
SGCEO43556 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SGCEO43556 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SGCEO43556 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 KRT18P56-201ENST00000507275 550 ntBASIC15.07■□□□□ 0
SGCEO43556 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.07■□□□□ 0
SGCEO43556 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.07■□□□□ 0
SGCEO43556 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.07■□□□□ 0
SGCEO43556 MTDHP3-201ENST00000594186 672 ntBASIC15.07■□□□□ 0
SGCEO43556 CLEC4GP1-201ENST00000596555 870 ntBASIC15.07■□□□□ 0
SGCEO43556 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 AL139288.1-201ENST00000623748 933 ntBASIC15.07■□□□□ 0
SGCEO43556 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.07■□□□□ 0
SGCEO43556 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.07■□□□□ 0
SGCEO43556 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SGCEO43556 LINC00554-201ENST00000564841 3011 ntBASIC15.07■□□□□ 0
SGCEO43556 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SGCEO43556 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 GPR89P-201ENST00000407924 1495 ntBASIC15.07■□□□□ 0
SGCEO43556 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SGCEO43556 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.06■□□□□ 0
SGCEO43556 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.06■□□□□ 0
SGCEO43556 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SGCEO43556 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.06■□□□□ 0
SGCEO43556 AC092053.1-201ENST00000605787 1936 ntBASIC15.06■□□□□ 0
SGCEO43556 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SGCEO43556 BX005266.1-201ENST00000473402 457 ntBASIC15.06■□□□□ 0
SGCEO43556 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
SGCEO43556 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.06■□□□□ 0
SGCEO43556 AC124947.2-201ENST00000547118 1133 ntBASIC15.06■□□□□ 0
SGCEO43556 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.06■□□□□ 0
SGCEO43556 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.06■□□□□ 0
SGCEO43556 AC004817.3-201ENST00000602957 2129 ntBASIC15.06■□□□□ 0
SGCEO43556 AL022326.1-202ENST00000641533 845 ntBASIC15.06■□□□□ 0
SGCEO43556 TSPY26P-202ENST00000565928 3884 ntBASIC15.06■□□□□ 0
SGCEO43556 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.06■□□□□ 0
SGCEO43556 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.06■□□□□ 0
SGCEO43556 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SGCEO43556 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.06■□□□□ 0
SGCEO43556 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.06■□□□□ 0
SGCEO43556 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms