Protein–RNA interactions for Protein: O00743

PPP6C, Serine/threonine-protein phosphatase 6 catalytic subunit, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6CO00743 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PPP6CO00743 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP6CO00743 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PPP6CO00743 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP6CO00743 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP6CO00743 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.51■□□□□ 0.23
PPP6CO00743 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PPP6CO00743 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP6CO00743 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP6CO00743 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.51■□□□□ 0.23
PPP6CO00743 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PPP6CO00743 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.51■□□□□ 0.23
PPP6CO00743 AC243591.1-201ENST00000452967 1364 ntBASIC16.51■□□□□ 0.23
PPP6CO00743 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.51■□□□□ 0.23
PPP6CO00743 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PPP6CO00743 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP6CO00743 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PPP6CO00743 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PPP6CO00743 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP6CO00743 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.5■□□□□ 0.23
PPP6CO00743 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PPP6CO00743 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PPP6CO00743 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.5■□□□□ 0.23
PPP6CO00743 AC106795.1-205ENST00000512851 1056 ntBASIC16.5■□□□□ 0.23
PPP6CO00743 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.5■□□□□ 0.23
PPP6CO00743 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP6CO00743 AC010331.1-201ENST00000611423 582 ntBASIC16.5■□□□□ 0.23
PPP6CO00743 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PPP6CO00743 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PPP6CO00743 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PPP6CO00743 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PPP6CO00743 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.5■□□□□ 0.23
PPP6CO00743 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.5■□□□□ 0.23
PPP6CO00743 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP6CO00743 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PPP6CO00743 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.49■□□□□ 0.23
PPP6CO00743 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
PPP6CO00743 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.49■□□□□ 0.23
PPP6CO00743 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 AC046158.3-201ENST00000624947 2558 ntBASIC16.49■□□□□ 0.23
PPP6CO00743 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
PPP6CO00743 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PPP6CO00743 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.49■□□□□ 0.23
PPP6CO00743 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.49■□□□□ 0.23
PPP6CO00743 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.49■□□□□ 0.23
PPP6CO00743 PRYP5-201ENST00000451909 266 ntBASIC16.49■□□□□ 0.23
PPP6CO00743 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.49■□□□□ 0.23
PPP6CO00743 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.49■□□□□ 0.23
PPP6CO00743 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.49■□□□□ 0.23
PPP6CO00743 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.49■□□□□ 0.23
PPP6CO00743 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.49■□□□□ 0.23
PPP6CO00743 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PPP6CO00743 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP6CO00743 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PPP6CO00743 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PPP6CO00743 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PPP6CO00743 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PPP6CO00743 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PPP6CO00743 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.48■□□□□ 0.23
PPP6CO00743 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PPP6CO00743 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PPP6CO00743 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PPP6CO00743 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PPP6CO00743 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PPP6CO00743 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PPP6CO00743 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PPP6CO00743 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PPP6CO00743 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms