Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SOX1O00570 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SOX1O00570 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SOX1O00570 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SOX1O00570 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOX1O00570 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOX1O00570 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOX1O00570 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.85■□□□□ 0.45
SOX1O00570 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOX1O00570 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SOX1O00570 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SOX1O00570 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.85■□□□□ 0.45
SOX1O00570 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.85■□□□□ 0.45
SOX1O00570 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.85■□□□□ 0.45
SOX1O00570 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.85■□□□□ 0.45
SOX1O00570 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.85■□□□□ 0.45
SOX1O00570 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.85■□□□□ 0.45
SOX1O00570 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.85■□□□□ 0.45
SOX1O00570 HNRNPUP1-201ENST00000554987 333 ntBASIC17.85■□□□□ 0.45
SOX1O00570 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.85■□□□□ 0.45
SOX1O00570 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
SOX1O00570 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.85■□□□□ 0.45
SOX1O00570 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.85■□□□□ 0.45
SOX1O00570 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOX1O00570 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.85■□□□□ 0.45
SOX1O00570 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOX1O00570 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SOX1O00570 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SOX1O00570 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.84■□□□□ 0.45
SOX1O00570 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.84■□□□□ 0.45
SOX1O00570 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.84■□□□□ 0.45
SOX1O00570 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SOX1O00570 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.84■□□□□ 0.45
SOX1O00570 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
SOX1O00570 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 RPL13AP20-201ENST00000459725 609 ntBASIC17.84■□□□□ 0.45
SOX1O00570 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.84■□□□□ 0.45
SOX1O00570 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.84■□□□□ 0.45
SOX1O00570 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SOX1O00570 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.84■□□□□ 0.45
SOX1O00570 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SOX1O00570 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SOX1O00570 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.84■□□□□ 0.45
SOX1O00570 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SOX1O00570 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.83■□□□□ 0.45
SOX1O00570 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SOX1O00570 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SOX1O00570 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.83■□□□□ 0.45
SOX1O00570 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SOX1O00570 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.83■□□□□ 0.45
SOX1O00570 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SOX1O00570 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 FAM220BP-201ENST00000377689 816 ntBASIC17.83■□□□□ 0.44
SOX1O00570 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.83■□□□□ 0.44
SOX1O00570 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.83■□□□□ 0.44
SOX1O00570 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.83■□□□□ 0.44
SOX1O00570 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.83■□□□□ 0.44
SOX1O00570 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
SOX1O00570 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.83■□□□□ 0.44
SOX1O00570 AC026740.1-201ENST00000607068 791 ntBASIC17.83■□□□□ 0.44
SOX1O00570 AC009542.2-202ENST00000619004 1067 ntBASIC17.83■□□□□ 0.44
SOX1O00570 AC128714.1-201ENST00000637035 887 ntBASIC17.83■□□□□ 0.44
SOX1O00570 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.83■□□□□ 0.44
SOX1O00570 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SOX1O00570 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SOX1O00570 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SOX1O00570 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.82■□□□□ 0.44
SOX1O00570 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.82■□□□□ 0.44
SOX1O00570 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms