Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR4O00206 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR4O00206 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TLR4O00206 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR4O00206 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR4O00206 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TLR4O00206 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.8■□□□□ 0.28
TLR4O00206 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TLR4O00206 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TLR4O00206 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TLR4O00206 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TLR4O00206 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.8■□□□□ 0.28
TLR4O00206 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.8■□□□□ 0.28
TLR4O00206 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.8■□□□□ 0.28
TLR4O00206 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.8■□□□□ 0.28
TLR4O00206 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TLR4O00206 AC012317.2-201ENST00000623305 2251 ntBASIC16.8■□□□□ 0.28
TLR4O00206 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.8■□□□□ 0.28
TLR4O00206 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TLR4O00206 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.8■□□□□ 0.28
TLR4O00206 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TLR4O00206 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.8■□□□□ 0.28
TLR4O00206 AL355306.1-201ENST00000415580 579 ntBASIC16.8■□□□□ 0.28
TLR4O00206 FAM8A3P-201ENST00000427218 844 ntBASIC16.8■□□□□ 0.28
TLR4O00206 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.8■□□□□ 0.28
TLR4O00206 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TLR4O00206 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.8■□□□□ 0.28
TLR4O00206 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.8■□□□□ 0.28
TLR4O00206 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TLR4O00206 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
TLR4O00206 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.8■□□□□ 0.28
TLR4O00206 MIR4515-201ENST00000584082 81 ntBASIC16.8■□□□□ 0.28
TLR4O00206 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.8■□□□□ 0.28
TLR4O00206 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR4O00206 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
TLR4O00206 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TLR4O00206 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TLR4O00206 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TLR4O00206 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.79■□□□□ 0.28
TLR4O00206 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TLR4O00206 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TLR4O00206 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TLR4O00206 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TLR4O00206 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.79■□□□□ 0.28
TLR4O00206 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.79■□□□□ 0.28
TLR4O00206 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.79■□□□□ 0.28
TLR4O00206 SPDYE11-202ENST00000450699 704 ntBASIC16.79■□□□□ 0.28
TLR4O00206 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.79■□□□□ 0.28
TLR4O00206 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.79■□□□□ 0.28
TLR4O00206 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.79■□□□□ 0.28
TLR4O00206 AC109322.1-201ENST00000524499 1264 ntBASIC16.79■□□□□ 0.28
TLR4O00206 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.79■□□□□ 0.28
TLR4O00206 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TLR4O00206 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TLR4O00206 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TLR4O00206 SPDYE9P-201ENST00000570642 692 ntBASIC16.79■□□□□ 0.28
TLR4O00206 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.79■□□□□ 0.28
TLR4O00206 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 AC099522.2-201ENST00000607001 744 ntBASIC16.79■□□□□ 0.28
TLR4O00206 SPDYE10P-202ENST00000612005 668 ntBASIC16.79■□□□□ 0.28
TLR4O00206 SPDYE8P-202ENST00000612377 668 ntBASIC16.79■□□□□ 0.28
TLR4O00206 AC093512.1-201ENST00000617969 520 ntBASIC16.79■□□□□ 0.28
TLR4O00206 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.79■□□□□ 0.28
TLR4O00206 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.79■□□□□ 0.28
TLR4O00206 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TLR4O00206 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TLR4O00206 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR4O00206 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TLR4O00206 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.78■□□□□ 0.28
TLR4O00206 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR4O00206 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
TLR4O00206 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms