Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 AC005332.1-201ENST00000577698 1310 ntBASIC18.06■□□□□ 0.48
RCCD1A6NED2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 SIGLEC30P-201ENST00000455569 941 ntBASIC18.06■□□□□ 0.48
RCCD1A6NED2 HLA-J-202ENST00000469281 1241 ntBASIC18.06■□□□□ 0.48
RCCD1A6NED2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RCCD1A6NED2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RCCD1A6NED2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RCCD1A6NED2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.05■□□□□ 0.48
RCCD1A6NED2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
RCCD1A6NED2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.05■□□□□ 0.48
RCCD1A6NED2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 AL020989.1-201ENST00000422979 469 ntBASIC18.05■□□□□ 0.48
RCCD1A6NED2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RCCD1A6NED2 BX276092.5-203ENST00000456199 560 ntBASIC18.05■□□□□ 0.48
RCCD1A6NED2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.05■□□□□ 0.48
RCCD1A6NED2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.05■□□□□ 0.48
RCCD1A6NED2 TPSP2-201ENST00000561760 610 ntBASIC18.05■□□□□ 0.48
RCCD1A6NED2 AL121672.3-201ENST00000608644 468 ntBASIC18.05■□□□□ 0.48
RCCD1A6NED2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RCCD1A6NED2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.05■□□□□ 0.48
RCCD1A6NED2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RCCD1A6NED2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.05■□□□□ 0.48
RCCD1A6NED2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RCCD1A6NED2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 SNX33P1-201ENST00000592116 1762 ntBASIC18.04■□□□□ 0.48
RCCD1A6NED2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 NSUN5P1-202ENST00000421140 1535 ntBASIC18.04■□□□□ 0.48
RCCD1A6NED2 NSUN5P2-203ENST00000457352 1529 ntBASIC18.04■□□□□ 0.48
RCCD1A6NED2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.04■□□□□ 0.48
RCCD1A6NED2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.04■□□□□ 0.48
RCCD1A6NED2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.04■□□□□ 0.48
RCCD1A6NED2 LINC00982-205ENST00000420957 435 ntBASIC18.04■□□□□ 0.48
RCCD1A6NED2 IGHV3-47-201ENST00000425060 335 ntBASIC18.04■□□□□ 0.48
RCCD1A6NED2 FAM210CP-201ENST00000445714 574 ntBASIC18.04■□□□□ 0.48
RCCD1A6NED2 VENTXP7-201ENST00000475503 772 ntBASIC18.04■□□□□ 0.48
RCCD1A6NED2 AC096582.2-201ENST00000510860 516 ntBASIC18.04■□□□□ 0.48
RCCD1A6NED2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.04■□□□□ 0.48
RCCD1A6NED2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.04■□□□□ 0.48
RCCD1A6NED2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.04■□□□□ 0.48
RCCD1A6NED2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
RCCD1A6NED2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms