Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 AL021920.2-201ENST00000624828 1351 ntBASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 SIGLEC16-201ENST00000599858 1437 ntBASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 ME2P1-201ENST00000426028 1970 ntBASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 AC006538.1-201ENST00000567905 1585 ntBASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 AC005052.1-201ENST00000625181 2492 ntBASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 HLA-J-202ENST00000469281 1241 ntBASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV9S1A1TA0A576 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 LINC00982-205ENST00000420957 435 ntBASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 AC073592.4-201ENST00000623827 446 ntBASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms