Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 CD99P1-205ENST00000527459 561 ntBASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 MIR4785-201ENST00000585005 73 ntBASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 AC092666.2-201ENST00000613287 246 ntBASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 ITM2C-210ENST00000620962 501 ntBASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 KRT8P10-201ENST00000450021 1447 ntBASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRDV1A0A1B0GX56 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 AC099063.4-201ENST00000641099 1602 ntBASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 AC009336.1-201ENST00000608941 1553 ntBASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 AC022532.1-201ENST00000624563 1728 ntBASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.96□□□□□ -0.01
TRDV1A0A1B0GX56 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRDV1A0A1B0GX56 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
TRDV1A0A1B0GX56 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRDV1A0A1B0GX56 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
TRDV1A0A1B0GX56 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRDV1A0A1B0GX56 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRDV1A0A1B0GX56 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
TRDV1A0A1B0GX56 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.96□□□□□ -0.02
TRDV1A0A1B0GX56 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.95□□□□□ -0.02
TRDV1A0A1B0GX56 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.95□□□□□ -0.02
TRDV1A0A1B0GX56 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.95□□□□□ -0.02
TRDV1A0A1B0GX56 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRDV1A0A1B0GX56 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRDV1A0A1B0GX56 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRDV1A0A1B0GX56 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRDV1A0A1B0GX56 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRDV1A0A1B0GX56 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.95□□□□□ -0.02
TRDV1A0A1B0GX56 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRDV1A0A1B0GX56 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRDV1A0A1B0GX56 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRDV1A0A1B0GX56 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms