Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC187A0A096LP49 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC187A0A096LP49 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC187A0A096LP49 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC187A0A096LP49 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC187A0A096LP49 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC187A0A096LP49 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC187A0A096LP49 MIR346-201ENST00000362234 95 ntBASIC16.02■□□□□ 0.16
CCDC187A0A096LP49 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.02■□□□□ 0.16
CCDC187A0A096LP49 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.02■□□□□ 0.16
CCDC187A0A096LP49 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.02■□□□□ 0.16
CCDC187A0A096LP49 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCDC187A0A096LP49 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 AC005332.8-201ENST00000622750 2735 ntBASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 AC241585.1-201ENST00000433527 519 ntBASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 GNAS-203ENST00000306120 1878 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms