Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 AC009336.1-201ENST00000608941 1553 ntBASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 AC092068.3-201ENST00000587894 2016 ntBASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 POM121L3P-201ENST00000419331 1163 ntBASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 AC073592.5-201ENST00000624854 528 ntBASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RHBDD3Q9Y3P4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 AC003669.1-201ENST00000334569 611 ntBASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 KLF4P1-201ENST00000412782 1185 ntBASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 UPK3BP1-201ENST00000428678 509 ntBASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms