Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 NSUN5P2-203ENST00000457352 1529 ntBASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 TOB2P1-201ENST00000469761 992 ntBASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 BNIP3P18-201ENST00000593976 575 ntBASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 AL391005.1-201ENST00000623953 2435 ntBASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 PCDHA1-201ENST00000378133 2726 ntBASIC16.03■□□□□ 0.16
THUMPD1Q9NXG2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 PCDHB17P-201ENST00000539533 2393 ntBASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 IER3-202ENST00000376377 1350 ntBASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 IGHV3-47-201ENST00000425060 335 ntBASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 AP002414.4-201ENST00000589764 1148 ntBASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 AC092329.2-201ENST00000598402 547 ntBASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 AP000867.4-201ENST00000641616 219 ntBASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD1Q9NXG2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 SIGLEC16-201ENST00000599858 1437 ntBASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.02■□□□□ 0.15
THUMPD1Q9NXG2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD1Q9NXG2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD1Q9NXG2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD1Q9NXG2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD1Q9NXG2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD1Q9NXG2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.01■□□□□ 0.15
THUMPD1Q9NXG2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD1Q9NXG2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD1Q9NXG2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
THUMPD1Q9NXG2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD1Q9NXG2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD1Q9NXG2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms