Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 MIR4492-201ENST00000581627 80 ntBASIC16.92■□□□□ 0.3
TREX1Q9NSU2 MPDU1-223ENST00000582151 728 ntBASIC16.92■□□□□ 0.3
TREX1Q9NSU2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 AL691432.3-201ENST00000621860 400 ntBASIC16.92■□□□□ 0.3
TREX1Q9NSU2 AC008735.5-201ENST00000623544 497 ntBASIC16.92■□□□□ 0.3
TREX1Q9NSU2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 FAM197Y8-203ENST00000450145 560 ntBASIC16.91■□□□□ 0.3
TREX1Q9NSU2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 AC136632.2-201ENST00000512891 861 ntBASIC16.91■□□□□ 0.3
TREX1Q9NSU2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 AC107918.2-201ENST00000530817 355 ntBASIC16.91■□□□□ 0.3
TREX1Q9NSU2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TREX1Q9NSU2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 AC079781.3-201ENST00000449110 356 ntBASIC16.9■□□□□ 0.3
TREX1Q9NSU2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 AC008667.4-201ENST00000607370 168 ntBASIC16.9■□□□□ 0.3
TREX1Q9NSU2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TREX1Q9NSU2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TREX1Q9NSU2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TREX1Q9NSU2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 KRT18P67-201ENST00000432816 1264 ntBASIC16.89■□□□□ 0.29
TREX1Q9NSU2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 AC012640.2-201ENST00000561606 901 ntBASIC16.89■□□□□ 0.29
TREX1Q9NSU2 AC148477.8-201ENST00000624298 468 ntBASIC16.89■□□□□ 0.29
TREX1Q9NSU2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms