Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 AC092865.5-201ENST00000545435 363 ntBASIC17.94■□□□□ 0.46
CD248Q9HCU0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 AC140113.2-201ENST00000604370 208 ntBASIC17.94■□□□□ 0.46
CD248Q9HCU0 Z83851.2-201ENST00000609564 659 ntBASIC17.94■□□□□ 0.46
CD248Q9HCU0 AC027601.4-201ENST00000611259 610 ntBASIC17.94■□□□□ 0.46
CD248Q9HCU0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 AP002414.3-201ENST00000589352 1468 ntBASIC17.94■□□□□ 0.46
CD248Q9HCU0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD248Q9HCU0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.94■□□□□ 0.46
CD248Q9HCU0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 AC106886.4-201ENST00000623557 2502 ntBASIC17.93■□□□□ 0.46
CD248Q9HCU0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 KRT18P27-201ENST00000427733 1299 ntBASIC17.93■□□□□ 0.46
CD248Q9HCU0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 DUTP2-201ENST00000519164 463 ntBASIC17.93■□□□□ 0.46
CD248Q9HCU0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 AC105339.3-201ENST00000560043 636 ntBASIC17.93■□□□□ 0.46
CD248Q9HCU0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 AC005052.1-201ENST00000625181 2492 ntBASIC17.93■□□□□ 0.46
CD248Q9HCU0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CD248Q9HCU0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD248Q9HCU0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.92■□□□□ 0.46
CD248Q9HCU0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 SIGLEC16-201ENST00000599858 1437 ntBASIC17.92■□□□□ 0.46
CD248Q9HCU0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 LAGE3P1-201ENST00000425356 484 ntBASIC17.92■□□□□ 0.46
CD248Q9HCU0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 AL356488.2-201ENST00000602755 427 ntBASIC17.92■□□□□ 0.46
CD248Q9HCU0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.92■□□□□ 0.46
CD248Q9HCU0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD248Q9HCU0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms