Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LRRC40Q9H9A6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC40Q9H9A6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC40Q9H9A6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
LRRC40Q9H9A6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC40Q9H9A6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC40Q9H9A6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC40Q9H9A6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC40Q9H9A6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC40Q9H9A6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC40Q9H9A6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 AC012313.10-201ENST00000623509 926 ntBASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC40Q9H9A6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 IFNL4P1-201ENST00000607083 540 ntBASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 AC004706.3-202ENST00000621574 984 ntBASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LRRC40Q9H9A6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 TNRC18P3-201ENST00000441896 2691 ntBASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 KRT8P49-201ENST00000604166 1432 ntBASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 KRT18P56-201ENST00000507275 550 ntBASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 AF238378.1-201ENST00000526806 358 ntBASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 AC025062.2-201ENST00000605477 670 ntBASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRC40Q9H9A6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms