Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LHX5Q9H2C1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LHX5Q9H2C1 ZNF259P1-201ENST00000407656 1365 ntBASIC17.9■□□□□ 0.46
LHX5Q9H2C1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LHX5Q9H2C1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LHX5Q9H2C1 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.89■□□□□ 0.46
LHX5Q9H2C1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.89■□□□□ 0.46
LHX5Q9H2C1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 UNC93B6-202ENST00000528242 690 ntBASIC17.89■□□□□ 0.45
LHX5Q9H2C1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 AC010654.1-201ENST00000615722 808 ntBASIC17.89■□□□□ 0.45
LHX5Q9H2C1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LHX5Q9H2C1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 AC009947.1-201ENST00000444350 727 ntBASIC17.88■□□□□ 0.45
LHX5Q9H2C1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 AC108751.1-201ENST00000490852 363 ntBASIC17.88■□□□□ 0.45
LHX5Q9H2C1 POLD2P1-201ENST00000511220 997 ntBASIC17.88■□□□□ 0.45
LHX5Q9H2C1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 AL353732.1-201ENST00000569618 1459 ntBASIC17.88■□□□□ 0.45
LHX5Q9H2C1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX5Q9H2C1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.87■□□□□ 0.45
LHX5Q9H2C1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX5Q9H2C1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
LHX5Q9H2C1 AL603756.1-201ENST00000606511 2163 ntBASIC17.87■□□□□ 0.45
LHX5Q9H2C1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX5Q9H2C1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LHX5Q9H2C1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX5Q9H2C1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LHX5Q9H2C1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX5Q9H2C1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX5Q9H2C1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.87■□□□□ 0.45
LHX5Q9H2C1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LHX5Q9H2C1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
LHX5Q9H2C1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms