Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 AL031058.1-201ENST00000561592 888 ntBASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 AC122134.1-202ENST00000569111 1201 ntBASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 FGF14-AS2-201ENST00000606448 1074 ntBASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP3-1Q9BYR8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 TUBB8P12-201ENST00000308911 1335 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 TUBB7P-202ENST00000428444 1305 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 TUBB8P7-204ENST00000567960 1332 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 FAM220CP-201ENST00000395253 831 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 AC013470.3-201ENST00000420252 1194 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 AC117947.1-201ENST00000427448 529 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 STK19B-204ENST00000512515 211 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 SETP12-201ENST00000514068 805 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 AP002490.2-201ENST00000524791 560 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 AL132657.2-201ENST00000564417 358 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 AD001527.2-201ENST00000622994 785 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 AC073912.3-201ENST00000624414 853 ntBASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP3-1Q9BYR8 AC092384.3-202ENST00000564646 2873 ntBASIC8.65□□□□□ -1.03
KRTAP3-1Q9BYR8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms