Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AC092850.2-201ENST00000623821 2697 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 DMBT1P1-203ENST00000636837 4628 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 KRASP1-201ENST00000407852 552 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AC239809.2-201ENST00000415381 517 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AL353807.1-201ENST00000427475 662 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 RPS2P4-201ENST00000476944 856 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 CA15P1-201ENST00000481698 905 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AC104390.1-201ENST00000555663 520 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 MTDHP1-201ENST00000605323 784 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 CR392000.1-201ENST00000624770 1228 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ABBA01031674.1-201ENST00000635145 728 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AC073111.5-205ENST00000641717 521 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms