Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 AC073592.5-201ENST00000624854 528 ntBASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 AC004817.3-201ENST00000602957 2129 ntBASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHAMP1Q96JM3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHAMP1Q96JM3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 KLF4P1-201ENST00000412782 1185 ntBASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 AL358472.4-201ENST00000633140 710 ntBASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms