Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 CHCHD2P8-201ENST00000429873 447 ntBASIC16.24■□□□□ 0.19
ITCHQ96J02 BX276092.5-203ENST00000456199 560 ntBASIC16.24■□□□□ 0.19
ITCHQ96J02 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.24■□□□□ 0.19
ITCHQ96J02 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.24■□□□□ 0.19
ITCHQ96J02 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.24■□□□□ 0.19
ITCHQ96J02 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.24■□□□□ 0.19
ITCHQ96J02 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ITCHQ96J02 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
ITCHQ96J02 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.24■□□□□ 0.19
ITCHQ96J02 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.24■□□□□ 0.19
ITCHQ96J02 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ITCHQ96J02 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
ITCHQ96J02 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.23■□□□□ 0.19
ITCHQ96J02 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.23■□□□□ 0.19
ITCHQ96J02 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ITCHQ96J02 AC091607.1-201ENST00000490318 1060 ntBASIC16.23■□□□□ 0.19
ITCHQ96J02 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.23■□□□□ 0.19
ITCHQ96J02 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.23■□□□□ 0.19
ITCHQ96J02 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.23■□□□□ 0.19
ITCHQ96J02 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 AL121672.3-201ENST00000608644 468 ntBASIC16.23■□□□□ 0.19
ITCHQ96J02 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.23■□□□□ 0.19
ITCHQ96J02 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ITCHQ96J02 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ITCHQ96J02 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ITCHQ96J02 TP73-AS1-210ENST00000637775 1455 ntBASIC16.22■□□□□ 0.19
ITCHQ96J02 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.22■□□□□ 0.19
ITCHQ96J02 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.22■□□□□ 0.19
ITCHQ96J02 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
ITCHQ96J02 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.22■□□□□ 0.19
ITCHQ96J02 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.22■□□□□ 0.19
ITCHQ96J02 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
ITCHQ96J02 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ITCHQ96J02 AL662844.4-201ENST00000606367 2838 ntBASIC16.22■□□□□ 0.19
ITCHQ96J02 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.22■□□□□ 0.19
ITCHQ96J02 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ITCHQ96J02 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.22■□□□□ 0.19
ITCHQ96J02 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.22■□□□□ 0.19
ITCHQ96J02 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.22■□□□□ 0.19
ITCHQ96J02 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.22■□□□□ 0.19
ITCHQ96J02 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.22■□□□□ 0.19
ITCHQ96J02 NTF6B-201ENST00000591913 560 ntBASIC16.22■□□□□ 0.19
ITCHQ96J02 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.22■□□□□ 0.19
ITCHQ96J02 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ITCHQ96J02 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 CYP2T1P-202ENST00000641596 2535 ntBASIC16.22■□□□□ 0.19
ITCHQ96J02 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ITCHQ96J02 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms