Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP6Q96FZ7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 LINC01568-207ENST00000641790 1380 ntBASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 EGFEM1P-202ENST00000431685 1563 ntBASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 SEC1P-202ENST00000473944 940 ntBASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.16■□□□□ 0.34
CHMP6Q96FZ7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 ME2P1-201ENST00000426028 1970 ntBASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms