Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 AL645728.1-201ENST00000366221 2101 ntBASIC16.39■□□□□ 0.21
VPS33AQ96AX1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 HLA-A-202ENST00000376806 1854 ntBASIC16.38■□□□□ 0.21
VPS33AQ96AX1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 AC011840.4-201ENST00000578471 627 ntBASIC16.38■□□□□ 0.21
VPS33AQ96AX1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.38■□□□□ 0.21
VPS33AQ96AX1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 CYP2T1P-202ENST00000641596 2535 ntBASIC16.38■□□□□ 0.21
VPS33AQ96AX1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.38■□□□□ 0.21
VPS33AQ96AX1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.37■□□□□ 0.21
VPS33AQ96AX1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 AC104076.2-201ENST00000448912 469 ntBASIC16.37■□□□□ 0.21
VPS33AQ96AX1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 IGHV3-41-201ENST00000613121 348 ntBASIC16.37■□□□□ 0.21
VPS33AQ96AX1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 AC132938.5-201ENST00000624980 1813 ntBASIC16.37■□□□□ 0.21
VPS33AQ96AX1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VPS33AQ96AX1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VPS33AQ96AX1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS33AQ96AX1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS33AQ96AX1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VPS33AQ96AX1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS33AQ96AX1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VPS33AQ96AX1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS33AQ96AX1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms