Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 AP002490.2-201ENST00000524791 560 ntBASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNIH3Q8TBE1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 KRT18P48-201ENST00000434763 852 ntBASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 AC068472.1-201ENST00000474589 881 ntBASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 AC079602.3-201ENST00000623931 403 ntBASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 AL391807.1-203ENST00000604392 2365 ntBASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 AC010491.1-201ENST00000563101 2797 ntBASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNIH3Q8TBE1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 GPR89P-201ENST00000407924 1495 ntBASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms