Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 AC005593.1-201ENST00000624894 515 ntBASIC18.16■□□□□ 0.5
LMO3Q8TAP4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 AC129492.6-201ENST00000611383 1305 ntBASIC18.16■□□□□ 0.5
LMO3Q8TAP4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.16■□□□□ 0.5
LMO3Q8TAP4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 AL512652.2-201ENST00000625156 1716 ntBASIC18.15■□□□□ 0.5
LMO3Q8TAP4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 AC098831.1-202ENST00000438821 336 ntBASIC18.15■□□□□ 0.5
LMO3Q8TAP4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LMO3Q8TAP4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LMO3Q8TAP4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
LMO3Q8TAP4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
LMO3Q8TAP4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 TPM4P1-201ENST00000436100 807 ntBASIC18.14■□□□□ 0.49
LMO3Q8TAP4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 AL353732.1-201ENST00000569618 1459 ntBASIC18.14■□□□□ 0.49
LMO3Q8TAP4 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LMO3Q8TAP4 ALOX12P2-203ENST00000570921 1945 ntBASIC18.13■□□□□ 0.49
LMO3Q8TAP4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 MRPL20P1-201ENST00000400819 433 ntBASIC18.13■□□□□ 0.49
LMO3Q8TAP4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 UNC93B6-202ENST00000528242 690 ntBASIC18.13■□□□□ 0.49
LMO3Q8TAP4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 AP001005.1-201ENST00000571755 1248 ntBASIC18.13■□□□□ 0.49
LMO3Q8TAP4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms