Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 SDHAP1-207ENST00000440850 2000 ntBASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 AC093677.2-201ENST00000600169 1863 ntBASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 AC073347.1-201ENST00000421633 2643 ntBASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.92
SPTSSBQ8NFR3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 AC005840.4-201ENST00000541242 2494 ntBASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 TSPY26P-201ENST00000476365 1326 ntBASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 COL6A4P2-202ENST00000504443 2753 ntBASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 MIR572-201ENST00000384983 95 ntBASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 YBX1P1-201ENST00000445822 960 ntBASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 AP001160.3-201ENST00000601484 763 ntBASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 ZNF142-201ENST00000411696 5926 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SPTSSBQ8NFR3 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SPTSSBQ8NFR3 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms