Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMG8Q8ND04 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMG8Q8ND04 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.21■□□□□ 0.51
SMG8Q8ND04 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SMG8Q8ND04 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SMG8Q8ND04 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SMG8Q8ND04 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMG8Q8ND04 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMG8Q8ND04 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 AC025678.2-201ENST00000562061 970 ntBASIC18.19■□□□□ 0.5
SMG8Q8ND04 AC092068.3-201ENST00000587894 2016 ntBASIC18.19■□□□□ 0.5
SMG8Q8ND04 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMG8Q8ND04 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SMG8Q8ND04 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SMG8Q8ND04 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.18■□□□□ 0.5
SMG8Q8ND04 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMG8Q8ND04 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SMG8Q8ND04 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.18■□□□□ 0.5
SMG8Q8ND04 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SMG8Q8ND04 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SMG8Q8ND04 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMG8Q8ND04 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMG8Q8ND04 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.18■□□□□ 0.5
SMG8Q8ND04 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.18■□□□□ 0.5
SMG8Q8ND04 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms