Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 AL391005.1-201ENST00000623953 2435 ntBASIC16.84■□□□□ 0.29
SNX31Q8N9S9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX31Q8N9S9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
SNX31Q8N9S9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SNX31Q8N9S9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.83■□□□□ 0.29
SNX31Q8N9S9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 AL135999.2-201ENST00000622438 1686 ntBASIC16.83■□□□□ 0.28
SNX31Q8N9S9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX31Q8N9S9 DOC2GP-204ENST00000639052 2548 ntBASIC16.83■□□□□ 0.28
SNX31Q8N9S9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 AC092068.3-201ENST00000587894 2016 ntBASIC16.82■□□□□ 0.28
SNX31Q8N9S9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 LINC02012-201ENST00000608206 1725 ntBASIC16.82■□□□□ 0.28
SNX31Q8N9S9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX31Q8N9S9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms