Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COMMD1Q8N668 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COMMD1Q8N668 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COMMD1Q8N668 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.19□□□□□ -0.14
COMMD1Q8N668 HYMAI-201ENST00000635591 3347 ntBASIC14.19□□□□□ -0.14
COMMD1Q8N668 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.19□□□□□ -0.14
COMMD1Q8N668 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COMMD1Q8N668 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.19□□□□□ -0.14
COMMD1Q8N668 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.19□□□□□ -0.14
COMMD1Q8N668 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.19□□□□□ -0.14
COMMD1Q8N668 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
COMMD1Q8N668 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
COMMD1Q8N668 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.19□□□□□ -0.14
COMMD1Q8N668 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.19□□□□□ -0.14
COMMD1Q8N668 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COMMD1Q8N668 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 LYSMD4-203ENST00000378904 2122 ntBASIC14.18□□□□□ -0.14
COMMD1Q8N668 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 AC104640.1-201ENST00000562617 2109 ntBASIC14.18□□□□□ -0.14
COMMD1Q8N668 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 KRT126P-201ENST00000549467 1181 ntBASIC14.18□□□□□ -0.14
COMMD1Q8N668 TPSP2-201ENST00000561760 610 ntBASIC14.18□□□□□ -0.14
COMMD1Q8N668 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 PRELID1P1-202ENST00000567272 903 ntBASIC14.18□□□□□ -0.14
COMMD1Q8N668 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 AC004263.2-201ENST00000617183 678 ntBASIC14.18□□□□□ -0.14
COMMD1Q8N668 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 AL024508.2-201ENST00000607749 1894 ntBASIC14.18□□□□□ -0.14
COMMD1Q8N668 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
COMMD1Q8N668 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COMMD1Q8N668 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 LINC00265-3P-201ENST00000447588 903 ntBASIC14.17□□□□□ -0.14
COMMD1Q8N668 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 RN7SL606P-201ENST00000472779 293 ntBASIC14.17□□□□□ -0.14
COMMD1Q8N668 AC104819.1-201ENST00000504587 486 ntBASIC14.17□□□□□ -0.14
COMMD1Q8N668 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 CLEC4GP1-201ENST00000596555 870 ntBASIC14.17□□□□□ -0.14
COMMD1Q8N668 LINC01711-201ENST00000598340 967 ntBASIC14.17□□□□□ -0.14
COMMD1Q8N668 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 AC009154.2-201ENST00000621177 724 ntBASIC14.17□□□□□ -0.14
COMMD1Q8N668 AC124864.1-201ENST00000623408 392 ntBASIC14.17□□□□□ -0.14
COMMD1Q8N668 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms