Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 PRSS29P-201ENST00000440800 595 ntBASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 MIR4751-201ENST00000578027 74 ntBASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 REXO1L3P-201ENST00000622202 1288 ntBASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 MIR1233-2-201ENST00000408138 82 ntBASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 MIR1233-1-201ENST00000408722 82 ntBASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 CRYGEP-201ENST00000412192 528 ntBASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 VN2R19P-201ENST00000442399 1052 ntBASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 AC106730.1-201ENST00000566722 1090 ntBASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCUBE3Q8IX30 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 ZNF259P1-201ENST00000407656 1365 ntBASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 AC010654.1-201ENST00000615722 808 ntBASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.84■□□□□ 0.45
SCUBE3Q8IX30 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCUBE3Q8IX30 AL121761.2-201ENST00000598007 1648 ntBASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms