Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 AC097493.3-201ENST00000509725 367 ntBASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 CU639417.3-201ENST00000624240 1404 ntBASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RP1L1Q8IWN7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 AC092580.3-201ENST00000430932 139 ntBASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 ACA64.2-201ENST00000459014 129 ntBASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 IGHV3-72-202ENST00000621503 303 ntBASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 TNXA-203ENST00000507684 2038 ntBASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 AP000842.3-202ENST00000569238 1080 ntBASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
RP1L1Q8IWN7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 HYMAI-201ENST00000635591 3347 ntBASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 TUBB3P1-201ENST00000405796 1332 ntBASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 AC116407.2-201ENST00000613639 860 ntBASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RP1L1Q8IWN7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms