Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 IGHV3-52-201ENST00000519770 353 ntBASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 AC109462.3-201ENST00000573934 613 ntBASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 AL031432.5-201ENST00000641059 760 ntBASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 AC144831.1-201ENST00000573312 2656 ntBASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 FAM210CP-201ENST00000445714 574 ntBASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.15□□□□□ -0.14
ANKRD55Q3KP44 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ANKRD55Q3KP44 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms