Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
EFNB3Q15768 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.47□□□□□ -0.09
EFNB3Q15768 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
EFNB3Q15768 TOP3BP1-201ENST00000420768 1380 ntBASIC14.47□□□□□ -0.09
EFNB3Q15768 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
EFNB3Q15768 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.46□□□□□ -0.09
EFNB3Q15768 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.46□□□□□ -0.09
EFNB3Q15768 HCG4-201ENST00000418983 998 ntBASIC14.46□□□□□ -0.09
EFNB3Q15768 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.46□□□□□ -0.09
EFNB3Q15768 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.46□□□□□ -0.09
EFNB3Q15768 AC140658.5-201ENST00000438532 169 ntBASIC14.46□□□□□ -0.09
EFNB3Q15768 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.46□□□□□ -0.09
EFNB3Q15768 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.46□□□□□ -0.09
EFNB3Q15768 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.46□□□□□ -0.09
EFNB3Q15768 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.46□□□□□ -0.09
EFNB3Q15768 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.46□□□□□ -0.09
EFNB3Q15768 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.46□□□□□ -0.09
EFNB3Q15768 SNHG9-202ENST00000564014 471 ntBASIC14.46□□□□□ -0.09
EFNB3Q15768 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.46□□□□□ -0.09
EFNB3Q15768 AC091167.2-201ENST00000579581 588 ntBASIC14.46□□□□□ -0.09
EFNB3Q15768 AC092902.6-201ENST00000641783 218 ntBASIC14.46□□□□□ -0.09
EFNB3Q15768 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.46□□□□□ -0.09
EFNB3Q15768 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.46□□□□□ -0.09
EFNB3Q15768 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EFNB3Q15768 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
EFNB3Q15768 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.46□□□□□ -0.1
EFNB3Q15768 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.46□□□□□ -0.1
EFNB3Q15768 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
EFNB3Q15768 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
EFNB3Q15768 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
EFNB3Q15768 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
EFNB3Q15768 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
EFNB3Q15768 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.46□□□□□ -0.1
EFNB3Q15768 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.45□□□□□ -0.1
EFNB3Q15768 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.45□□□□□ -0.1
EFNB3Q15768 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
EFNB3Q15768 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.45□□□□□ -0.1
EFNB3Q15768 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
EFNB3Q15768 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.45□□□□□ -0.1
EFNB3Q15768 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
EFNB3Q15768 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.45□□□□□ -0.1
EFNB3Q15768 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.45□□□□□ -0.1
EFNB3Q15768 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.45□□□□□ -0.1
EFNB3Q15768 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.45□□□□□ -0.1
EFNB3Q15768 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
EFNB3Q15768 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.45□□□□□ -0.1
EFNB3Q15768 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
EFNB3Q15768 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
EFNB3Q15768 AL021920.2-201ENST00000624828 1351 ntBASIC14.45□□□□□ -0.1
EFNB3Q15768 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EFNB3Q15768 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.44□□□□□ -0.1
EFNB3Q15768 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
EFNB3Q15768 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
EFNB3Q15768 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.44□□□□□ -0.1
EFNB3Q15768 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
EFNB3Q15768 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms