Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA1Q09470 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA1Q09470 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.66■□□□□ 0.58
KCNA1Q09470 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.66■□□□□ 0.58
KCNA1Q09470 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA1Q09470 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA1Q09470 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.66■□□□□ 0.58
KCNA1Q09470 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA1Q09470 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.66■□□□□ 0.58
KCNA1Q09470 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KCNA1Q09470 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
KCNA1Q09470 AL590627.1-203ENST00000421194 1026 ntBASIC18.66■□□□□ 0.58
KCNA1Q09470 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
KCNA1Q09470 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.66■□□□□ 0.58
KCNA1Q09470 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
KCNA1Q09470 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.66■□□□□ 0.58
KCNA1Q09470 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.66■□□□□ 0.58
KCNA1Q09470 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA1Q09470 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA1Q09470 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
KCNA1Q09470 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
KCNA1Q09470 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.66■□□□□ 0.58
KCNA1Q09470 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA1Q09470 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
KCNA1Q09470 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA1Q09470 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.66■□□□□ 0.58
KCNA1Q09470 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.66■□□□□ 0.58
KCNA1Q09470 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.66■□□□□ 0.58
KCNA1Q09470 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KCNA1Q09470 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.66■□□□□ 0.58
KCNA1Q09470 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
KCNA1Q09470 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KCNA1Q09470 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.65■□□□□ 0.58
KCNA1Q09470 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
KCNA1Q09470 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.65■□□□□ 0.58
KCNA1Q09470 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.65■□□□□ 0.58
KCNA1Q09470 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
KCNA1Q09470 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.65■□□□□ 0.58
KCNA1Q09470 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 GGTLC5P-201ENST00000617623 998 ntBASIC18.65■□□□□ 0.58
KCNA1Q09470 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.65■□□□□ 0.58
KCNA1Q09470 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.65■□□□□ 0.58
KCNA1Q09470 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.65■□□□□ 0.58
KCNA1Q09470 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 AC104109.2-201ENST00000602919 1418 ntBASIC18.65■□□□□ 0.58
KCNA1Q09470 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA1Q09470 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.65■□□□□ 0.58
KCNA1Q09470 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KCNA1Q09470 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
KCNA1Q09470 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KCNA1Q09470 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
KCNA1Q09470 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNA1Q09470 RPL13AP23-201ENST00000480739 586 ntBASIC18.64■□□□□ 0.57
KCNA1Q09470 AC034105.1-201ENST00000563488 319 ntBASIC18.64■□□□□ 0.57
KCNA1Q09470 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.64■□□□□ 0.57
KCNA1Q09470 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNA1Q09470 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
KCNA1Q09470 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
KCNA1Q09470 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNA1Q09470 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KCNA1Q09470 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNA1Q09470 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.64■□□□□ 0.57
KCNA1Q09470 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNA1Q09470 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.64■□□□□ 0.57
KCNA1Q09470 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA1Q09470 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
KCNA1Q09470 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA1Q09470 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA1Q09470 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
KCNA1Q09470 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.63■□□□□ 0.57
KCNA1Q09470 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA1Q09470 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms