Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
DSC1Q08554 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
DSC1Q08554 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.93■□□□□ 0.46
DSC1Q08554 AC107890.1-201ENST00000422478 521 ntBASIC17.93■□□□□ 0.46
DSC1Q08554 AC142381.1-201ENST00000426099 345 ntBASIC17.93■□□□□ 0.46
DSC1Q08554 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.93■□□□□ 0.46
DSC1Q08554 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.93■□□□□ 0.46
DSC1Q08554 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.93■□□□□ 0.46
DSC1Q08554 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.93■□□□□ 0.46
DSC1Q08554 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.93■□□□□ 0.46
DSC1Q08554 AC073389.1-201ENST00000595595 795 ntBASIC17.93■□□□□ 0.46
DSC1Q08554 AC013467.2-201ENST00000605472 835 ntBASIC17.93■□□□□ 0.46
DSC1Q08554 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
DSC1Q08554 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
DSC1Q08554 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.93■□□□□ 0.46
DSC1Q08554 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
DSC1Q08554 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
DSC1Q08554 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DSC1Q08554 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
DSC1Q08554 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.93■□□□□ 0.46
DSC1Q08554 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DSC1Q08554 AC018470.1-201ENST00000624790 3129 ntBASIC17.92■□□□□ 0.46
DSC1Q08554 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DSC1Q08554 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DSC1Q08554 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DSC1Q08554 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DSC1Q08554 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
DSC1Q08554 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.92■□□□□ 0.46
DSC1Q08554 AC125807.1-201ENST00000483097 614 ntBASIC17.92■□□□□ 0.46
DSC1Q08554 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.92■□□□□ 0.46
DSC1Q08554 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DSC1Q08554 AC140878.1-201ENST00000565277 250 ntBASIC17.92■□□□□ 0.46
DSC1Q08554 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.92■□□□□ 0.46
DSC1Q08554 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.92■□□□□ 0.46
DSC1Q08554 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.92■□□□□ 0.46
DSC1Q08554 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.92■□□□□ 0.46
DSC1Q08554 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DSC1Q08554 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
DSC1Q08554 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
DSC1Q08554 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DSC1Q08554 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
DSC1Q08554 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
DSC1Q08554 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
DSC1Q08554 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
DSC1Q08554 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.91■□□□□ 0.46
DSC1Q08554 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.91■□□□□ 0.46
DSC1Q08554 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.91■□□□□ 0.46
DSC1Q08554 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.91■□□□□ 0.46
DSC1Q08554 MIR943-201ENST00000401286 94 ntBASIC17.91■□□□□ 0.46
DSC1Q08554 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.91■□□□□ 0.46
DSC1Q08554 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.91■□□□□ 0.46
DSC1Q08554 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.91■□□□□ 0.46
DSC1Q08554 RNA5SP421-201ENST00000516864 134 ntBASIC17.91■□□□□ 0.46
DSC1Q08554 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.91■□□□□ 0.46
DSC1Q08554 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.91■□□□□ 0.46
DSC1Q08554 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.91■□□□□ 0.46
DSC1Q08554 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.91■□□□□ 0.46
DSC1Q08554 AJ011932.1-201ENST00000621707 465 ntBASIC17.91■□□□□ 0.46
DSC1Q08554 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.91■□□□□ 0.46
DSC1Q08554 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.91■□□□□ 0.46
DSC1Q08554 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
DSC1Q08554 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
DSC1Q08554 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DSC1Q08554 AC006277.1-201ENST00000624348 1610 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms