Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCS1Q01581 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMGCS1Q01581 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 KRT16P4-201ENST00000453883 522 ntBASIC16.4■□□□□ 0.22
HMGCS1Q01581 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 AL732292.2-201ENST00000609649 430 ntBASIC16.4■□□□□ 0.22
HMGCS1Q01581 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCS1Q01581 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGCS1Q01581 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
HMGCS1Q01581 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.39■□□□□ 0.21
HMGCS1Q01581 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 DUX4L17-201ENST00000557360 1267 ntBASIC16.39■□□□□ 0.21
HMGCS1Q01581 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HMGCS1Q01581 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 TUBB8P12-201ENST00000308911 1335 ntBASIC16.39■□□□□ 0.21
HMGCS1Q01581 TUBB7P-202ENST00000428444 1305 ntBASIC16.39■□□□□ 0.21
HMGCS1Q01581 TUBB8P7-204ENST00000567960 1332 ntBASIC16.39■□□□□ 0.21
HMGCS1Q01581 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCS1Q01581 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms