Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL20P78556 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL20P78556 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.42□□□□□ -0.26
CCL20P78556 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL20P78556 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CCL20P78556 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL20P78556 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL20P78556 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL20P78556 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CCL20P78556 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 AC097488.1-201ENST00000507834 756 ntBASIC13.41□□□□□ -0.26
CCL20P78556 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.41□□□□□ -0.26
CCL20P78556 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL20P78556 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.41□□□□□ -0.26
CCL20P78556 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL20P78556 AF186192.3-201ENST00000583427 947 ntBASIC13.41□□□□□ -0.26
CCL20P78556 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL20P78556 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL20P78556 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CCL20P78556 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL20P78556 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL20P78556 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CCL20P78556 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL20P78556 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL20P78556 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CCL20P78556 PRAL-201ENST00000624952 3286 ntBASIC13.4□□□□□ -0.26
CCL20P78556 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CCL20P78556 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL20P78556 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCL20P78556 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL20P78556 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CCL20P78556 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
CCL20P78556 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CCL20P78556 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 SEC1P-202ENST00000473944 940 ntBASIC13.4□□□□□ -0.26
CCL20P78556 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.4□□□□□ -0.26
CCL20P78556 AP002490.2-201ENST00000524791 560 ntBASIC13.4□□□□□ -0.26
CCL20P78556 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL20P78556 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
CCL20P78556 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.4□□□□□ -0.26
CCL20P78556 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL20P78556 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CCL20P78556 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CCL20P78556 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL20P78556 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.4□□□□□ -0.26
CCL20P78556 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL20P78556 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL20P78556 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms